Code حسب Baoqiang Chen (21099509)

"…We implemented machine learning algorithms using the following R packages: rpart for Decision Trees, gbm for Gradient Boosting Machines (GBM), ranger for Random Forests, the glm function for Generalized Linear Models (GLM), and xgboost for Extreme Gradient Boosting (XGB). …"

Core data حسب Baoqiang Chen (21099509)

"…We implemented machine learning algorithms using the following R packages: rpart for Decision Trees, gbm for Gradient Boosting Machines (GBM), ranger for Random Forests, the glm function for Generalized Linear Models (GLM), and xgboost for Extreme Gradient Boosting (XGB). …"

Landscape17 حسب Vlad Carare (22092515)

"…</p><p dir="ltr">We utilized TopSearch, an open-source Python package, to perform landscape exploration, at an estimated cost of 10⁵CPUh. …"

<b>Rethinking neighbourhood boundaries for urban planning: A data-driven framework for perception-based delineation</b> حسب Shubham Pawar (22471285)

"…</p><h2>Project Structure</h2><pre><pre>Perception_based_neighbourhoods/<br>├── raw_data/<br>│ ├── ET_cells_glasgow/ # Glasgow grid cells for analysis<br>│ └── glasgow_open_built/ # Built area boundaries<br>├── svi_module/ # Street View Image processing<br>│ ├── svi_data/<br>│ │ ├── svi_info.csv # Image metadata (output)<br>│ │ └── images/ # Downloaded images (output)<br>│ ├── get_svi_data.py # Download street view images<br>│ └── trueskill_score.py # Generate TrueSkill scores<br>├── perception_module/ # Perception prediction<br>│ ├── output_data/<br>│ │ └── glasgow_perception.nc # Perception scores (demo data)<br>│ ├── trained_models/ # Pre-trained models<br>│ ├── pred.py # Predict perceptions from images<br>│ └── readme.md # Training instructions<br>└── cluster_module/ # Neighbourhood clustering<br> ├── output_data/<br> │ └── clusters.shp # Final neighbourhood boundaries<br> └── cluster_perceptions.py # Clustering algorithm<br></pre></pre><h2>Prerequisites</h2><ul><li>Python 3.8 or higher</li><li>GDAL/OGR libraries (for geospatial processing)</li></ul><h2>Installation</h2><ol><li>Clone this repository:</li></ol><p dir="ltr">Download the zip file</p><pre><pre>cd perception_based_neighbourhoods<br></pre></pre><ol><li>Install required dependencies:</li></ol><pre><pre>pip install -r requirements.txt<br></pre></pre><p dir="ltr">Required libraries include:</p><ul><li>geopandas</li><li>pandas</li><li>numpy</li><li>xarray</li><li>scikit-learn</li><li>matplotlib</li><li>torch (PyTorch)</li><li>efficientnet-pytorch</li></ul><h2>Usage Guide</h2><h3>Step 1: Download Street View Images</h3><p dir="ltr">Download street view images based on the Glasgow grid sampling locations.…"

MCCN Case Study 2 - Spatial projection via modelled data حسب Donald Hobern (21435904)

"…This study demonstrates: 1) Description of spatial assets using STAC, 2) Loading heterogeneous data sources into a cube, 3) Spatial projection in xarray using different algorithms offered by the <a href="https://pypi.org/project/PyKrige/" rel="nofollow" target="_blank">pykrige</a> and <a href="https://pypi.org/project/rioxarray/" rel="nofollow" target="_blank">rioxarray</a> packages.…"

Data Sheet 1_Machine learning models integrating intracranial artery calcification to predict outcomes of mechanical thrombectomy.pdf حسب Guangzong Li (16696443)

"…Eleven ML algorithms were trained and validated using Python, and external validation and performance evaluations were conducted. …"

DataSheet1_Application of a risk score model based on glycosylation-related genes in the prognosis and treatment of patients with low-grade glioma.docx حسب Binbin Zou (11358315)

"…However, the biological function of glycosylation-related genes in LGG remains largely unexplored. …"

Navigating complex care pathways–healthcare workers’ perspectives on health system barriers for children with tuberculous meningitis in Cape Town, South Africa حسب Dzunisani Patience Baloyi (19452687)

"…An integrated data system and alert functions could flag multiple healthcare visits and improve communication between different healthcare facilities during diagnosis and treatment. …"

Behavioral raw data recorded by HABITS autonomously حسب bowen yu (19822908)

"…<p dir="ltr">Mice are among the most prevalent animal models in neuroscience, leveraging the extensive physiological, imaging and genetic tools available for studying their brain. However, the development of new behavioral paradigms for mice has been laborious and inconsistent, impeding the investigation of complex cognition. …"

EXASCALE COMPUTING AND ITS IMPACT ON HIGH-PERFORMANCE COMPUTING حسب Jace Marden (22025762)

"…Possibilities are still not completely explored, exascale may result in a greater understanding of medical and materials science, more powerful algorithms for artificial intelligence (AI) and Machine Learning (ML), or the ability to create functional mimics of the human brain for neurological and possible cybernetic developments. …"

A paired dataset of multi-modal MRI at 3 Tesla and 7 Tesla with manual hippocampal subfield segmentations on 7T T2-weighted images حسب Shuyu Li (18859198)

"…<p dir="ltr">The hippocampus, a region of critical interest within clinical neuroscience, is recognized as a complex structure comprising distinct subfields with unique functional attributes, connectivity patterns, and susceptibilities to disease. …"

<b>NanoNeuroBot: Beyond Healing, Toward Human Connection</b> حسب ahmed hossam (21420446)

"…</p><p dir="ltr">1.NanoNeuroBot is an AI-guided, ingestible nanobot pill engineered to cross the blood-brain barrier and deliver site-specific neuronal regeneration. …"

Table 1_Neurochallenges in smart cities: state-of-the-art, perspectives, and research directions.docx حسب Begüm Özkaynak (20445146)

"…This paper aims to explore how neuroscientific and neurotechnological solutions can contribute to the development of smart cities, as experts in various fields underline that real-time sensing designs and control algorithms inspired by the brain could help build and plan urban systems that are healthy, safe, inclusive, and resilient. …"

Data Sheet 1_COL8A1 as a pro-inflammatory mediator bridges immune evasion and therapy resistance in glioma.docx حسب Jiachong Wang (22818095)

"…Background<p>Glioma remains the most aggressive and therapy-resistant brain tumor, with a highly immunosuppressive tumor microenvironment. …"

Image 13_Immune intrinsic escape signature stratifies prognosis, characterizes the tumor immune microenvironment, and identifies tumorigenic PPP1R8 in glioblastoma multiforme patie... حسب Ran Du (552530)

"…TIME analysis was carried out using multiple deconvolution algorithms. Additionally, functional assays including CCK8, cell cycle, and apoptosis assays were conducted on PPP1R8-silenced U251 cells using CRISPR/Cas9 technology</p>Results<p>Thirty-six IERGs were associated with GBM outcomes, with 20 linked to poor survival and 16 to better outcomes. …"

Image 4_Immune intrinsic escape signature stratifies prognosis, characterizes the tumor immune microenvironment, and identifies tumorigenic PPP1R8 in glioblastoma multiforme patien... حسب Ran Du (552530)

"…TIME analysis was carried out using multiple deconvolution algorithms. Additionally, functional assays including CCK8, cell cycle, and apoptosis assays were conducted on PPP1R8-silenced U251 cells using CRISPR/Cas9 technology</p>Results<p>Thirty-six IERGs were associated with GBM outcomes, with 20 linked to poor survival and 16 to better outcomes. …"

Image 5_Immune intrinsic escape signature stratifies prognosis, characterizes the tumor immune microenvironment, and identifies tumorigenic PPP1R8 in glioblastoma multiforme patien... حسب Ran Du (552530)

"…TIME analysis was carried out using multiple deconvolution algorithms. Additionally, functional assays including CCK8, cell cycle, and apoptosis assays were conducted on PPP1R8-silenced U251 cells using CRISPR/Cas9 technology</p>Results<p>Thirty-six IERGs were associated with GBM outcomes, with 20 linked to poor survival and 16 to better outcomes. …"

Image 10_Immune intrinsic escape signature stratifies prognosis, characterizes the tumor immune microenvironment, and identifies tumorigenic PPP1R8 in glioblastoma multiforme patie... حسب Ran Du (552530)

"…TIME analysis was carried out using multiple deconvolution algorithms. Additionally, functional assays including CCK8, cell cycle, and apoptosis assays were conducted on PPP1R8-silenced U251 cells using CRISPR/Cas9 technology</p>Results<p>Thirty-six IERGs were associated with GBM outcomes, with 20 linked to poor survival and 16 to better outcomes. …"

Image 8_Immune intrinsic escape signature stratifies prognosis, characterizes the tumor immune microenvironment, and identifies tumorigenic PPP1R8 in glioblastoma multiforme patien... حسب Ran Du (552530)

"…TIME analysis was carried out using multiple deconvolution algorithms. Additionally, functional assays including CCK8, cell cycle, and apoptosis assays were conducted on PPP1R8-silenced U251 cells using CRISPR/Cas9 technology</p>Results<p>Thirty-six IERGs were associated with GBM outcomes, with 20 linked to poor survival and 16 to better outcomes. …"

Table 4_Immune intrinsic escape signature stratifies prognosis, characterizes the tumor immune microenvironment, and identifies tumorigenic PPP1R8 in glioblastoma multiforme patien... حسب Ran Du (552530)

"…TIME analysis was carried out using multiple deconvolution algorithms. Additionally, functional assays including CCK8, cell cycle, and apoptosis assays were conducted on PPP1R8-silenced U251 cells using CRISPR/Cas9 technology</p>Results<p>Thirty-six IERGs were associated with GBM outcomes, with 20 linked to poor survival and 16 to better outcomes. …"