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61
Dataset of networks used in assessing the Troika algorithm for clique partitioning and community detection
Published 2025“…Each network is provided in .gml format or .pkl format which can be read into a networkX graph object using standard functions from the networkX library in Python. For accessing other networks used in the study, please refer to the article for references to the primary sources of those network data.…”
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GridScopeRodents: High-Resolution Global Typical Rodents Distribution Projections from 2021 to 2100 under Diverse SSP-RCP Scenarios
Published 2025“…Using occurrence data and environmental variable, we employ the Maximum Entropy (MaxEnt) algorithm within the species distribution modeling (SDM) framework to estimate occurrence probability at a spatial resolution of 1/12° (~10 km). …”
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66
Hippocampal and cortical activity reflect early hyperexcitability in an Alzheimer's mouse model
Published 2025“…</p><p dir="ltr">All data are available upon request. The standalone Python implementation of the fE/I algorithm is available under a CC-BY-NC-SA license at <a href="https://github.com/arthur-ervin/crosci" target="_blank">https://github.com/arthur-ervin/crosci</a>. …”
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67
S1 Graphical abstract -
Published 2025“…<div><p>Engineered heart tissues (EHTs) have shown great potential in recapitulating tissue organization, functions, and cell-cell interactions of the human heart <i>in vitro</i>. …”
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68
<b>AI for imaging plant stress in invasive species </b>(dataset from the article https://doi.org/10.1093/aob/mcaf043)
Published 2025“…<p dir="ltr">This dataset contains the data used in the article <a href="https://academic.oup.com/aob/advance-article/doi/10.1093/aob/mcaf043/8074229" rel="noreferrer" target="_blank">"Machine Learning and digital Imaging for Spatiotemporal Monitoring of Stress Dynamics in the clonal plant Carpobrotus edulis: Uncovering a Functional Mosaic</a>", which includes the complete set of collected leaf images, image features (predictors) and response variables used to train machine learning regression algorithms.…”
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Table 4_Integrated cytomembrane proteomics identifies EpCAM/MGST1 as therapeutic targets in metastatic laryngeal carcinoma.xlsx
Published 2025“…Potential immunotherapy targets were identified and prioritized using an in silico screening algorithm for cytomembrane proteome.</p>Results<p>The in silico screening algorithm for cytomembrane proteome led to the recognition of EpCAM and MGST1 as potential targets. …”
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Table 5_Integrated cytomembrane proteomics identifies EpCAM/MGST1 as therapeutic targets in metastatic laryngeal carcinoma.xlsx
Published 2025“…Potential immunotherapy targets were identified and prioritized using an in silico screening algorithm for cytomembrane proteome.</p>Results<p>The in silico screening algorithm for cytomembrane proteome led to the recognition of EpCAM and MGST1 as potential targets. …”
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Table 2_Integrated cytomembrane proteomics identifies EpCAM/MGST1 as therapeutic targets in metastatic laryngeal carcinoma.docx
Published 2025“…Potential immunotherapy targets were identified and prioritized using an in silico screening algorithm for cytomembrane proteome.</p>Results<p>The in silico screening algorithm for cytomembrane proteome led to the recognition of EpCAM and MGST1 as potential targets. …”
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Table 6_Integrated cytomembrane proteomics identifies EpCAM/MGST1 as therapeutic targets in metastatic laryngeal carcinoma.xlsx
Published 2025“…Potential immunotherapy targets were identified and prioritized using an in silico screening algorithm for cytomembrane proteome.</p>Results<p>The in silico screening algorithm for cytomembrane proteome led to the recognition of EpCAM and MGST1 as potential targets. …”
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Table 1_Integrated cytomembrane proteomics identifies EpCAM/MGST1 as therapeutic targets in metastatic laryngeal carcinoma.docx
Published 2025“…Potential immunotherapy targets were identified and prioritized using an in silico screening algorithm for cytomembrane proteome.</p>Results<p>The in silico screening algorithm for cytomembrane proteome led to the recognition of EpCAM and MGST1 as potential targets. …”
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Table 3_Integrated cytomembrane proteomics identifies EpCAM/MGST1 as therapeutic targets in metastatic laryngeal carcinoma.xlsx
Published 2025“…Potential immunotherapy targets were identified and prioritized using an in silico screening algorithm for cytomembrane proteome.</p>Results<p>The in silico screening algorithm for cytomembrane proteome led to the recognition of EpCAM and MGST1 as potential targets. …”
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NanoDB: Research Activity Data Management System
Published 2024“…Cross-Platform Compatibility: Works on Windows, macOS, and Linux. In a Python environment or as an executable. Ease of Implementation: Using the flexibility of the Python framework all the data setup and algorithm can me modified and new functions can be easily added. …”
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Code and Data for 'Fabrication and testing of lensed fiber optic probes for distance sensing using common path low coherence interferometry'
Published 2025“…Distance Sensing</p><p dir="ltr">Code and data to demonstrate extracting distance sensing data from A-scans and to generate Fig. 8 using the algorithm described in Fig. 7. Functions to generate distance measurements are in 'distance_sensing_utilities.py' and an example of how to use this on data in the 'data' folder is in 'distance_sensing_example.py', which generates Fig 8. …”
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Brain-in-the-Loop Learning for Intelligent Vehicle Decision-Making
Published 2025“…In this paper, we utilize functional near-infrared spectroscopy (fNIRS) signals as real-time human risk-perception feedback to establish a brain-in-the-loop (BiTL) trained artificial intelligence algorithm for decision-making. …”
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Mechanomics Code - JVT
Published 2025“…The functions were tested respectively in: MATLAB 2018a or youger, Python 3.9.4, R 4.0.3.…”
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Table 1_Kefir and healthy aging: revealing thematic gaps through AI-assisted screening and semantic evidence mapping.docx
Published 2025“…To overcome this fragmentation, we applied an integrative approach that combines a cutting-edge AI-assisted algorithm for evidence screening with a Python-based semantic clustering pipeline. …”
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Table 2_Kefir and healthy aging: revealing thematic gaps through AI-assisted screening and semantic evidence mapping.docx
Published 2025“…To overcome this fragmentation, we applied an integrative approach that combines a cutting-edge AI-assisted algorithm for evidence screening with a Python-based semantic clustering pipeline. …”