Top 3-enriched pathways with literature evidence. by Paolo Perlasca (9909695)

Subjects:

Schematic diagram depicting the <i>in-vitro</i> co-culture model setup. by Elias Vera-Siguenza (16993830)

Code snippets to add user-specific custom functionality in PyNoetic. by Gursimran Singh (575288)

Subjects:

Feature selection algorithm. by Mahmoud Zeydabadinezhad (12289570)

“…Our analysis pipeline included pre-processing steps, feature extraction from both time and frequency domains, a voting algorithm for selecting features, and model training and validation. …”

Python implementation from Symplectic decomposition from submatrix determinants by Jason L. Pereira (11598632)

“…Python implementation of the algorithm and demonstration of how to use the functions.…”

Building Unit Extractor for Metal–Organic Frameworks by Prosun Halder (9616600)

“…This work presents MOF BU developer (mBUD), a platform to deconstruct the BUs, such as metal nodes, organic linkers, and functional groups of the MOF structure. The deconstruction algorithm has been assessed on the MOF structures of the CoRE MOF 2019 database. …”

Mathematical expressions, weight functions, domains, and orthogonality conditions of various orthogonal polynomials. by Abeer Aljohani (18497914)

Subjects:

Algoritmo de clasificación de expresiones de odio por tipos en español (Algorithm for classifying hate expressions by type in Spanish) by Daniel Pérez Palau (11097348)

“…</li></ul><p dir="ltr"><b>File Structure</b></p><p dir="ltr">The code generates and saves:</p><ul><li>Weights of the trained model (.h5)</li><li>Configured tokenizer</li><li>Training history in CSV</li><li>Requirements file</li></ul><p dir="ltr"><b>Important Notes</b></p><ul><li>The model excludes category 2 during training</li><li>Implements transfer learning from a pre-trained model for binary hate detection</li><li>Includes early stopping callbacks to prevent overfitting</li><li>Uses class weighting to handle category imbalances</li></ul><p dir="ltr">The process of creating this algorithm is explained in the technical report located at: Blanco-Valencia, X., De Gregorio-Vicente, O., Ruiz Iniesta, A., & Said-Hung, E. (2025). …”

Overview of the CoRE-ATAC framework. by Asa Thibodeau (3164796)

“…In the final step, CoRE-ATAC classifies <i>cis</i>-REs into 4 functional classes: promoter, enhancer, insulator, and other.…”

Algorithm process of BPNN. by Xiaoxiang Cao (12644851)

Identification and functional analysis of hub genes. by Wei Ya Lan (22403712)

GraSPy: an Open Source Python Package for Statistical Connectomics by Benjamin Pedigo (6580352)

“…We developed GraSPy, an open-source Python toolkit for statistical inference on graphs. …”

Analysis of weighted co-expression networks in Parkinson’s disease. by Lixia Chen (614030)

Growth rate comparison between models and experimental results in mono-culture and co-culture. by Elias Vera-Siguenza (16993830)

Development of the CO₂ Adsorption Model on Porous Adsorbent Materials Using Machine Learning Algorithms by Hossein Mashhadimoslem (11456548)

“…In this research study, we created a data set and collected data points from porous adsorbents (2789) from 21 published papers, including carbon-based, porous polymers, metal–organic frameworks (MOFs), and zeolites, to understand their characteristics for CO₂ adsorption. Different machine learning (ML) algorithms, such as NN, MLP-GWO, XGBoost, RF, DT, and SVM, have been applied to display the CO₂ adsorption performance as a function of characteristics and adsorption isotherm parameters. …”

Modular architecture design of PyNoetic showing all its constituent functions. by Gursimran Singh (575288)

Subjects:

Functional profiling of GS height <i>preserved</i> modules with cumulative evidence for genomic risk effect on co-expression. by Eugenia Radulescu (319733)

Functional profiling of GS-SCZ <i>preserved</i> modules with cumulative evidence for genomic risk effect on co-expression. by Eugenia Radulescu (319733)

Adaptive H-REMD simulation algorithm. by Danial Pourjafar-Dehkordi (7165523)

The workflow used to analyze imbalanced and balanced sequences. by Solomon Shiferaw Beyene (9143178)