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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
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3221
Table 2_Polyamine metabolism related gene index prediction of prognosis and immunotherapy response in breast cancer.xlsx
Published 2025“…Additionally, we analyzed the immune microenvironment and enriched pathways across different subtypes using multiple algorithms. Finally, the “oncoPredict” R package was used to assess potential drug sensitivities in high-risk and low-risk groups.…”
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3222
Image 1_Immune intrinsic escape signature stratifies prognosis, characterizes the tumor immune microenvironment, and identifies tumorigenic PPP1R8 in glioblastoma multiforme patien...
Published 2025“…TIME analysis was carried out using multiple deconvolution algorithms. Additionally, functional assays including CCK8, cell cycle, and apoptosis assays were conducted on PPP1R8-silenced U251 cells using CRISPR/Cas9 technology</p>Results<p>Thirty-six IERGs were associated with GBM outcomes, with 20 linked to poor survival and 16 to better outcomes. …”
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3223
Table 2_Identification of regulatory cell death-related genes during MASH progression using bioinformatics analysis and machine learning strategies.xlsx
Published 2025“…A total of 101 combinations of 10 machine learning algorithms were employed to screen for characteristic RCD-related differentially expressed genes (DEGs) that reflect the progression of MASH. …”
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3224
Table 1_Identification of regulatory cell death-related genes during MASH progression using bioinformatics analysis and machine learning strategies.xlsx
Published 2025“…A total of 101 combinations of 10 machine learning algorithms were employed to screen for characteristic RCD-related differentially expressed genes (DEGs) that reflect the progression of MASH. …”
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3225
Raw LC-MS/MS and RNA-Seq Mitochondria data
Published 2025“…Differentially altered pathways were evaluated by using the enrich plot package in R for visualization of functional enrichment (i.e., dot plot).</p>…”
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3226
<b>dGenhancer v2</b>: A software tool for designing oligonucleotides that can trigger gene-specific Enhancement of Protein Translation.
Published 2024“…<p dir="ltr"> Software tool designed to calculate 5’UTR properties, enabling the creation of oligonucleotides that can trigger gene-specific enhancement of protein translation.<br> An excel-based calculator - dGenhancer can be used to search for putative 5’UTR cis-acting elements, which functional activity could be determined by Gibbs energy-dependent secondary structure formation. …”