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algorithm harding » algorithm using (Expand Search), algorithm machine (Expand Search), algorithm showing (Expand Search)
harding function » hardening function (Expand Search), hearing functions (Expand Search), varying functions (Expand Search)
algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
python function » protein function (Expand Search)
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141
Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling
Published 2019“…This program implements the “modeling by satisfaction of spatial restraints” strategy and its core algorithm has not been altered significantly since the early 1990s. …”
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Python code, input data, and outputs of Fourier analysis and Dynamic Time Warping from McGlasson et al.
Published 2024“…</p> <h4><strong>Python Function Files:</strong></h4> <p>radarfuncs.py: Holds three functions used for FFT and DTW analysis.…”
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Within binding sites of the same size, the ones with the highest average overlap (lowest average distance d<sub>ij</sub>) with the others are disproportionately represented in the...
Published 2024Subjects: “…unlike approximation algorithms…”
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158
Formulation of the nucleotide String Packing Problem (SPP) as an Orienteering Problem (OP).
Published 2024Subjects: “…unlike approximation algorithms…”
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Modifying the linear integer programming model objective to include a position bias for activator sites and repressor sites.
Published 2024Subjects: “…unlike approximation algorithms…”
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Stipulating positional constraints to design bacterial promoters.
Published 2024Subjects: “…unlike approximation algorithms…”