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    Revisiting the “satisfaction of spatial restraints” approach of MODELLER for protein homology modeling by Giacomo Janson (8138517)

    Published 2019
    “…Secondly, we have inquired into how the incorporation of statistical potential terms (such as the DOPE potential) in the MODELLER’s objective function impacts positively 3D modeling quality by providing a small but consistent improvement in metrics such as GDT-HA and lDDT and a large increase in stereochemical quality. …”
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