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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
python function » protein function (Expand Search)
model fusion » model using (Expand Search), level fusion (Expand Search)
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Expression vs genomics for predicting dependencies
Published 2024“…Features types are indicated by the column matrix suffixes:</p><p dir="ltr">_Exp: expression</p><p dir="ltr">_Hot: hotspot mutation</p><p dir="ltr">_Dam: damaging mutation</p><p dir="ltr">_OtherMut: other mutation</p><p dir="ltr">_CN: copy number</p><p dir="ltr">_GSEA: ssGSEA score for an MSigDB gene set</p><p dir="ltr">_MethTSS: Methylation of transcription start sites</p><p dir="ltr">_MethCpG: Methylation of CpG islands</p><p dir="ltr">_Fusion: Gene fusions</p><p dir="ltr">_Cell: cell tissue properties</p><p dir="ltr"><br></p><p dir="ltr">NormLRT.csv: the normLRT score for the given perturbation</p><p dir="ltr"><br></p><p dir="ltr">RFAdditionScore.csv: similar to ENAdditionScore, but using a random forest model.…”