Examples of annotated and homology-transferred interactions. by Chloé Dequeker (4966165)

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Comparison with DPPI on PPDBv2. by Chloé Dequeker (4966165)

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Principle of the method. by Chloé Dequeker (4966165)

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Functional enrichment analyses of Co-genes. by Qingcong Zheng (11169094)

Dark protein space in terms of statistics. by Tian Cai (4227052)

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Description: Subnetwork of TFRC from functional tissue network of PDAC. by Enze Liu (6286262)

Results of searching performance of different algorithm models on the Sphere function and Griewank function. by Rui Zhang (13940)

“…<p>Results of searching performance of different algorithm models on the Sphere function and Griewank function.…”

Kinase network model of female vs. male DLPFC. by Erica A. K. DePasquale (11851483)

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Average input sensitivities for ANN model trained with only biophysical features. by Saksham Phul (12437059)

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<b>Algorithm Pseudocode</b> by Yibin Zhao (22425801)

Table_2_Delayed Comparison and Apriori Algorithm (DCAA): A Tool for Discovering Protein–Protein Interactions From Time-Series Phosphoproteomic Data.DOCX by Lianhong Ding (9753227)

“…DCAA is based on the idea that there is a lag between functional alterations and the corresponding changes in protein synthesis/PTM. …”

Table_1_Delayed Comparison and Apriori Algorithm (DCAA): A Tool for Discovering Protein–Protein Interactions From Time-Series Phosphoproteomic Data.XLSX by Lianhong Ding (9753227)

“…DCAA is based on the idea that there is a lag between functional alterations and the corresponding changes in protein synthesis/PTM. …”

Results of searching performance of different algorithm models on the Rosenbrock function, Ackley function, and Rastrigin function. by Rui Zhang (13940)

Average input sensitivities for ANN model trained with combined evolutionary and biophysical features. by Saksham Phul (12437059)

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List of Up and Down regulated genes in <i>Dyrk1a</i>^<i>C/C</i> hippocampi compared with controls (Deseq algorithm, P<0.025). by Véronique Brault (160595)

Description: Subnetwork of TFRC from functional cell-line network of PDAC. by Enze Liu (6286262)

The statistics of number of proteins and phosphorylation S/T/Y sites for different organisms. by Chao Wang (146527)

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Supplementary Tables 1 - 7 from A Meta-analysis of Lung Cancer Gene Expression Identifies <i>PTK7</i> as a Survival Gene in Lung Adenocarcinoma by Ron Chen (14910750)

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Unsupervised Machine Learning Organization of the Functional Dark Proteome of Gram-Negative “Superbugs”: Six Protein Clusters Amenable for Distinct Scientific Applications by Carlos Sicilia (14228509)

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Supplemental files to the study "Limitations of Current Machine-Learning Models in Predicting Enzymatic Functions for Uncharacterized Proteins" by Valerie de Crecy-Lagard (12823436)

“…<p dir="ltr">Thirty to seventy percent of proteins in any given genome have no assigned function and have been labeled as the protein “unknome”. …”