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algorithm gene » algorithm where (Expand Search), algorithm etc (Expand Search), algorithm pre (Expand Search)
algorithm npc » algorithm etc (Expand Search), algorithm pca (Expand Search), algorithm _ (Expand Search)
npc function » spc function (Expand Search), gpcr function (Expand Search), fc function (Expand Search)
algorithm gene » algorithm where (Expand Search), algorithm etc (Expand Search), algorithm pre (Expand Search)
algorithm npc » algorithm etc (Expand Search), algorithm pca (Expand Search), algorithm _ (Expand Search)
npc function » spc function (Expand Search), gpcr function (Expand Search), fc function (Expand Search)
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Efficient algorithms to discover alterations with complementary functional association in cancer
Published 2019“…Among such patterns, <i>mutual exclusivity</i> has been employed by several recent methods that have shown its effectiveness in characterizing gene sets associated to cancer. Mutual exclusivity arises because of the complementarity, at the functional level, of alterations in genes which are part of a group (e.g., a <i>pathway</i>) performing a given function. …”
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Comparison of results of different algorithms.
Published 2022Subjects: “…differentially expressed genes…”
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Algorithmic assessment reveals functional implications of GABRD gene variants linked to idiopathic generalized epilepsy
Published 2024“…</p> <p>The study employs a combination of in silico algorithms to analyze 82 variants of unknown clinical significance of GABRD gene sourced from the ClinVar database. …”
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The eVIP algorithm uses RNA-seq data to predict the function of somatic mutations.
Published 2021Subjects: -
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EAT-Rice: A predictive model for flanking gene expression of T-DNA insertion activation-tagged rice mutants by machine learning approaches
Published 2019“…<div><p>T-DNA activation-tagging technology is widely used to study rice gene functions. When T-DNA inserts into genome, the flanking gene expression may be altered using CaMV 35S enhancer, but the affected genes still need to be validated by biological experiment. …”
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