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algorithm protein » algorithm within (Expand Search), algorithm pre (Expand Search)
algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
algorithm i » algorithm ai (Expand Search), algorithm _ (Expand Search), algorithm b (Expand Search)
i function » _ function (Expand Search), a function (Expand Search), link function (Expand Search)
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NRPStransformer, an Accurate Adenylation Domain Specificity Prediction Algorithm for Genome Mining of Nonribosomal Peptides
Published 2025“…Leveraging the sequences within the flavodoxin-like subdomain, we developed a substrate specificity prediction algorithm using a protein language model, achieving 92% overall prediction accuracy for 43 frequently observed amino acids, significantly improving the prediction reliability. …”
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Linear-regression-based algorithms succeed at identifying the correct functional groups in synthetic data, and multi-group algorithms recover more information.
Published 2024“…<p>(A), (B) Algorithm performance, evaluated over 50 simulated datasets generated as described in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012590#pcbi.1012590.g001" target="_blank">Fig 1</a> with <i>N</i> = 3 true groups, 900 samples and 10% simulated measurement noise. …”
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