Data Sheet 1_Genetic variants and molecular profiling of 46,XY gonadal dysgenesis using whole-exome sequencing.docx حسب Ning Zhang (23771)

"…These variant sites are conserved among species and were predicted to be damaging according to functional algorithms and protein analyses. Additionally, 71.4% of the GATA4 amino acid changes in 46,XY GD were located in or close to the N-terminal zinc finger (N-ZF) domain. …"

Table 1_Trajectories of health conditions predict cardiovascular disease risk among middle-aged and older adults: a national cohort study.docx حسب Wenlong Li (571749)

"…Ten machine learning (ML) algorithms were applied to evaluate the predictive capacity of different variable groups for CVD. …"

Data Sheet 1_Multi-omics exploration of chaperone-mediated immune-proteostasis crosstalk in vascular dementia and identification of diagnostic biomarkers.xlsx حسب Wentong Li (492392)

"…Differentially expressed genes (DEGs) were identified using the limma package (log2FC>0.656, p<0.05). Protein-protein interaction (PPI) networks were constructed using the STRING database. …"

Data Sheet 5_Multi-omics exploration of chaperone-mediated immune-proteostasis crosstalk in vascular dementia and identification of diagnostic biomarkers.csv حسب Wentong Li (492392)

"…Differentially expressed genes (DEGs) were identified using the limma package (log2FC>0.656, p<0.05). Protein-protein interaction (PPI) networks were constructed using the STRING database. …"

Supplementary file 1_Multi-omics exploration of chaperone-mediated immune-proteostasis crosstalk in vascular dementia and identification of diagnostic biomarkers.docx حسب Wentong Li (492392)

"…Differentially expressed genes (DEGs) were identified using the limma package (log2FC>0.656, p<0.05). Protein-protein interaction (PPI) networks were constructed using the STRING database. …"

Data Sheet 2_Multi-omics exploration of chaperone-mediated immune-proteostasis crosstalk in vascular dementia and identification of diagnostic biomarkers.xlsx حسب Wentong Li (492392)

"…Differentially expressed genes (DEGs) were identified using the limma package (log2FC>0.656, p<0.05). Protein-protein interaction (PPI) networks were constructed using the STRING database. …"

Data Sheet 3_Multi-omics exploration of chaperone-mediated immune-proteostasis crosstalk in vascular dementia and identification of diagnostic biomarkers.xlsx حسب Wentong Li (492392)

"…Differentially expressed genes (DEGs) were identified using the limma package (log2FC>0.656, p<0.05). Protein-protein interaction (PPI) networks were constructed using the STRING database. …"

Data Sheet 4_Multi-omics exploration of chaperone-mediated immune-proteostasis crosstalk in vascular dementia and identification of diagnostic biomarkers.xlsx حسب Wentong Li (492392)

"…Differentially expressed genes (DEGs) were identified using the limma package (log2FC>0.656, p<0.05). Protein-protein interaction (PPI) networks were constructed using the STRING database. …"

Bioinformatics-based screening and experimental validation of biomarkers for the treatment of connective tissue-associated interstitial lung disease with liquorice and dried ginger... حسب Hui Yuan (402180)

"…</p> <p>Public datasets of Peripheral blood mononuclear cells (PBMCs) from CTD-ILD (n = 4) and connective tissue disease-associated non-Inflammatory lung disease (CTD-NILD) (n = 3) patients were analyzed using differential expression (p.adj < 0.05 & |log2 Fold Change (FC)| > 0.5), protein-protein interaction networks, and cytohubba algorithms (Top5 genes from six algorithms). …"

Supplementary file 1_Identification and validation of biomarkers in gastric cancer-associated membranous nephropathy: Insights from comprehensive bioinformatics analysis and machin... حسب Qianqian Xu (731060)

"…LASSO regression and Random Forest algorithms were used to identify hub genes associated with GC-related MN. …"

Table 1_Identification and validation of biomarkers in gastric cancer-associated membranous nephropathy: Insights from comprehensive bioinformatics analysis and machine learning.xl... حسب Qianqian Xu (731060)

"…LASSO regression and Random Forest algorithms were used to identify hub genes associated with GC-related MN. …"

Data Sheet 1_Identification and validation of biomarkers in gastric cancer-associated membranous nephropathy: Insights from comprehensive bioinformatics analysis and machine learni... حسب Qianqian Xu (731060)

"…LASSO regression and Random Forest algorithms were used to identify hub genes associated with GC-related MN. …"

Table 1_Metabolic-stem cell crosstalk in PD: NK1 cells as key mediators from a bioinformatics perspective.xlsx حسب Junxin Zhao (16721864)

"…Our analytical workflow entailed: differential expression screening, functional enrichment, protein–protein interaction (PPI) network construction, and machine learning (ML) algorithms.…"

Data Sheet 1_Metabolic-stem cell crosstalk in PD: NK1 cells as key mediators from a bioinformatics perspective.pdf حسب Junxin Zhao (16721864)

"…Our analytical workflow entailed: differential expression screening, functional enrichment, protein–protein interaction (PPI) network construction, and machine learning (ML) algorithms.…"

Supplementary Material for: FCGR3A Drives Innate Immune Activation via M1 Macrophage Polarization in Pediatric IBD حسب figshare admin karger (2628495)

"…Hub genes were determined using protein–protein interaction (PPI) networks, least absolute shrinkage and selection operator regression, and random forest algorithms. …"

Table 1_ENO1-related gene signature predicts prognosis and therapeutic response in diffuse large B-cell lymphoma.docx حسب Wenli Yan (9235217)

"…Here, we integrated multi-omics profiling (RIP-seq, RNA-seq, and protein interactome analysis) to identify ERGs and established a prognostic model by machine learning algorithms.…"

Table 3_Combining WGCNA and machine learning to identify mechanisms and biomarkers of hyperthyroidism and atrial fibrillation.xlsx حسب Linyuan Wang (359295)

"…Differential gene analysis was performed using the “limma” package, and overlapping genes shared by both diseases were identified through weighted gene co-expression network analysis (WGCNA), followed by functional enrichment analysis. …"

Table 4_Combining WGCNA and machine learning to identify mechanisms and biomarkers of hyperthyroidism and atrial fibrillation.docx حسب Linyuan Wang (359295)

"…Differential gene analysis was performed using the “limma” package, and overlapping genes shared by both diseases were identified through weighted gene co-expression network analysis (WGCNA), followed by functional enrichment analysis. …"

Table 5_Combining WGCNA and machine learning to identify mechanisms and biomarkers of hyperthyroidism and atrial fibrillation.docx حسب Linyuan Wang (359295)

"…Differential gene analysis was performed using the “limma” package, and overlapping genes shared by both diseases were identified through weighted gene co-expression network analysis (WGCNA), followed by functional enrichment analysis. …"

Table 1_Combining WGCNA and machine learning to identify mechanisms and biomarkers of hyperthyroidism and atrial fibrillation.xlsx حسب Linyuan Wang (359295)

"…Differential gene analysis was performed using the “limma” package, and overlapping genes shared by both diseases were identified through weighted gene co-expression network analysis (WGCNA), followed by functional enrichment analysis. …"