Pipeline of the interactor algorithm. حسب Jose Cleydson F. Silva (8685594)

(a-b) The LASSO algorithm was used for hyperparameter tuning and identification of the important predictive features. حسب Devi Soorya Narayana Sasikumar (22331743)

الموضوعات:

Immune infiltration analysis by ssGSEA algorithm. حسب Yubin Xue (1537042)

The results of LASSO regression algorithm. حسب Xue Fu (549661)

Immune infiltration analysis by CIBERSORT algorithm. حسب Lanying Shen (22755930)

The GOR4 and SOPMA algorithm findings. حسب Ahmad Abdullah Mahdeen (19704401)

Immune infiltration analysis by CIBERSORT algorithm. حسب Lanying Shen (22755930)

A) Ranking of models trained on different feature sets across all tested algorithms, sorted by their F1-score. حسب Jose Cleydson F. Silva (8685594)

A framework for improving localisation prediction algorithms. حسب Sven B. Gould (12237287)

"…Classifiers on which the algorithms are trained could include parameters such as the evolutionary distance of a species, non-coding regions, or a protein’s abundance as a currently neglected factor. …"

PATH has state-of-the-art performance versus previous binding affinity prediction algorithms. حسب Yuxi Long (11024307)

الموضوعات:

Two protein-ligand complexes shown with their persistence fingerprint. حسب Yuxi Long (11024307)

الموضوعات:

Protein-Protein Interaction (PPI) and ceRNA Regulatory Network Analysis. حسب Jie Chu (293795)

Core genes were selected through PPI analysis based on three algorithms. حسب Dong-Hee Han (140305)

"…<b>(B)</b> The priority of the top 10 genes was evaluated through MNC, which identifies clusters of protein nodes that are more functionally connected to each other and selects the central proteins within the cluster. …"

Functional enrichment analyses of Co-genes. حسب Qingcong Zheng (11169094)

Strong negative correlation between the precision of algorithms and the evolutionary distance from the training data. حسب Sven B. Gould (12237287)

(a) Radar chart of these algorithms (23 Benchmark functions), (b) The sorting diagram of these algorithms (23 Benchmark functions). حسب Yu Liu (6938)

"…<p>(a) Radar chart of these algorithms (23 Benchmark functions), (b) The sorting diagram of these algorithms (23 Benchmark functions).…"

Identification and functional analysis of hub genes. حسب Wei Ya Lan (22403712)

"…<p>(A) Protein–protein interaction (PPI) network constructed using the STRING database with a confidence score > 0.04. …"

Visualization by PaCMAP [52] shows that persistence fingerprint clusters protein-ligand complexes with similar binding affinity reasonably well, even beyond the training dataset (P... حسب Yuxi Long (11024307)

الموضوعات:

The results of gene ontology analysis of the hub genes, including (a) biological process, (b) cellular components, (c) molecular functions, and (d) pathway analysis. حسب Devi Soorya Narayana Sasikumar (22331743)

الموضوعات:

Scatter plots of PATH⁺ and our implementation of TNet-BP’s predictions on a held-out, test subset of PDBBind v2020 refined set for one run (90:10 train:test split ratio,... حسب Yuxi Long (11024307)

الموضوعات: