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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
python function » protein function (Expand Search)
algorithm from » algorithm flow (Expand Search)
algorithm used » algorithm based (Expand Search), algorithms based (Expand Search), algorithm using (Expand Search)
from function » from functional (Expand Search), fc function (Expand Search)
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Flowchart of the specific incarnation of the BO algorithm used in the experiments.
Published 2020“…To choose the next pipeline configuration to evaluate, the BO algorithm uses an Expected Improvement function to trade off maximisation of QS with the need to fully learn the GP. …”
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Efficient algorithms to discover alterations with complementary functional association in cancer
Published 2019“…We provide analytic evidence of the effectiveness of UNCOVER in finding high-quality solutions and show experimentally that UNCOVER finds sets of alterations significantly associated with functional targets in a variety of scenarios. In particular, we show that our algorithms find sets which are better than the ones obtained by the state-of-the-art method, even when sets are evaluated using the statistical score employed by the latter. …”
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FAR-1: A Fast Integer Reduction Algorithm Compared to Collatz and Half-Collatz
Published 2025Subjects: -
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Dataset of networks used in assessing the Troika algorithm for clique partitioning and community detection
Published 2025“…Each network is provided in .gml format or .pkl format which can be read into a networkX graph object using standard functions from the networkX library in Python. …”
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Proportion of simulated data with improved likelihood from using multiple restarts (Algorithm 1).
Published 2025Subjects: “…routinely applicable algorithm…”
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An expectation-maximization algorithm for finding noninvadable stationary states.
Published 2020“…<i>(b)</i> Metabolic byproducts move the relevant unperturbed state from <b>R</b><sup>0</sup> (gray ‘x’) to (black ‘x’), which is itself a function of the current environmental conditions. …”
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Coarse-fine optimization algorithm.
Published 2025“…The improved gradient extraction method combines the Scale Invariant Feature Transformation (SIFT) algorithm to form a new multi-scale image sharpness evaluation function, SIFT Quad-Tenen. …”
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Efficient Algorithms for GPU Accelerated Evaluation of the DFT Exchange-Correlation Functional
Published 2025“…We show that batched formation of the XC matrix from the density matrix yields the best performance for large (>O(103) basis functions), sparse systems such as glycine chains and water clusters. …”
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Data from: Structural and Functional Analysis of Multi-interface Domains
Published 2012“…This work applies graph theory and algorithms to discover fingerprints for the multiple interfaces of a domain and to establish associations between the interfaces and functions, based on a huge set of multi-interface proteins from PDB. …”