Showing 1 - 20 results of 7,651 for search '(( algorithm python function ) OR ((( algorithm gene function ) OR ( algorithm steps function ))))', query time: 0.69s Refine Results
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    BOFdat Step 3: Identifying species-specific metabolic end goals. by Jean-Christophe Lachance (6619307)

    Published 2019
    “…(B) Schematic description of the effect of adding a biomass precursor on the prediction of gene essentiality in the model. A simplified metabolic network composed of two linear pathways is depicted with its corresponding stoichiometric matrix S, in which the objective function is presented in the blue column (<i>v</i><sub><i>obj</i></sub>). …”
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    Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements by Pascal Wang (10130612)

    Published 2021
    “…In `main.py`, the parameters for the TAMS algorithm are specified (trajectory time, time step, score function, number of particles, type of score threshold, maximum number of iterations, noise level etc.). …”
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    Overview of the Cell2Spatial algorithm. by Huamei Li (8815955)

    Published 2025
    Subjects: “…minimizing assignment algorithm…”
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    BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data by Jean-Christophe Lachance (6619307)

    Published 2019
    “…Despite its importance, no standardized computational platform is currently available to generate species-specific biomass objective functions in a data-driven, unbiased fashion. To fill this gap in the metabolic modeling software ecosystem, we implemented BOFdat, a Python package for the definition of a <b>B</b>iomass <b>O</b>bjective <b>F</b>unction from experimental <b>dat</b>a. …”
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