Presentation of the DySCo framework. by Giuseppe de Alteriis (20846230)

“…<p>A: What is dynamic Functional Connectivity: i) We can start from any set of brain recordings, where each signal is referred to a brain location (e.g. fMRI, EEG, intracranial recordings in rodents, and more). ii) “Static” Functional Connectivity (FC) is a matrix where each entry is a time aggregated functional measure of interaction between two regions, for example, the Pearson Correlation Coefficient. iii) Dynamic Functional Connectivity (dFC) is a FC matrix (that can be calculated in different ways, see below) that changes with time, under the assumption that patterns of brain interactions are non-stationary. …”

Data Sheet 1_Identification of key ferroptosis-related genes and therapeutic target in nasopharyngeal carcinoma.zip by Yuanyuan Gu (3813658)

“…Objective<p>Nasopharyngeal carcinoma (NPC) is a malignant tumor, but the role of ferroptosis-related genes in NPC remains unclear. …”

NanoDB: Research Activity Data Management System by Lorenci Gjurgjaj (19702207)

“…Cross-Platform Compatibility: Works on Windows, macOS, and Linux. In a Python environment or as an executable. Ease of Implementation: Using the flexibility of the Python framework all the data setup and algorithm can me modified and new functions can be easily added. …”

Code and Data for 'Fabrication and testing of lensed fiber optic probes for distance sensing using common path low coherence interferometry' by Radu Stancu (21165068)

“…Distance Sensing</p><p dir="ltr">Code and data to demonstrate extracting distance sensing data from A-scans and to generate Fig. 8 using the algorithm described in Fig. 7. Functions to generate distance measurements are in 'distance_sensing_utilities.py' and an example of how to use this on data in the 'data' folder is in 'distance_sensing_example.py', which generates Fig 8. …”

PSO-Optimized Electronic Load Controller with Intelligent Energy Recovery for Self-Excited Induction Generator Based Micro-Hydro Systems by MRINAL KANTI RAJAK (21838169)

“…The dataset includes: (1) <b>PSO configuration parameters</b> - complete algorithm setup with population size (N=20), adaptive inertia weights (0.9→0.4), time-varying cognitive/social coefficients (c1: 2.5→0.5, c2: 0.5→2.5), search space boundaries for all 10 optimization variables, and convergence criteria specifications; (2) <b>Multi-objective fitness function data</b> - detailed weight adaptation formulas, individual objective convergence statistics (voltage: 15.3 iter, frequency: 19.2 iter, THD: 12.8 iter, energy: 23.0 iter), and composite fitness evolution from 0.537 to 0.903 over 50 iterations; (3) <b>Particle dynamics tracking</b> - complete position and velocity trajectories for all 20 particles across optimization dimensions [Kpv, Kiv, Kdv, Kpf, Kif, Kdf, ma, θphase, fc, Ppump,ref], diversity evolution (100%→8%), and exploration/exploitation transition patterns; (4) <b>Real-time implementation metrics</b> - computational requirements (2.6 kB memory, 67% CPU utilization), execution timing (0.83 ms average, 1.2 ms worst-case), and synchronization protocols for 100 Hz optimization loops; and (5) <b>Validation datasets</b> - performance verification across six different load conditions, convergence statistics, and algorithm robustness testing results demonstrating consistent ±1.8% voltage regulation and ±0.9% frequency stability achievements, all provided in structured CSV/JSON formats with comprehensive documentation under CC-BY license.…”

Data Sheet 1_Identification of key biomarkers related to fibrocartilage chondrocytes for osteoarthritis based on bulk, single-cell transcriptomic data.docx by Bailin Pan (20300112)

“…</p>Results<p>The study identified 545 marker genes associated with FC in OA. GO and KEGG analyses revealed their biological functions; microarray analysis identified 243 DEGs on which functional-enrichment analysis were conducted. …”

Data Sheet 2_Identification of key biomarkers related to fibrocartilage chondrocytes for osteoarthritis based on bulk, single-cell transcriptomic data.csv by Bailin Pan (20300112)

“…</p>Results<p>The study identified 545 marker genes associated with FC in OA. GO and KEGG analyses revealed their biological functions; microarray analysis identified 243 DEGs on which functional-enrichment analysis were conducted. …”

Brain-in-the-Loop Learning for Intelligent Vehicle Decision-Making by Xiaofei Zhang (16483224)

“…In this paper, we utilize functional near-infrared spectroscopy (fNIRS) signals as real-time human risk-perception feedback to establish a brain-in-the-loop (BiTL) trained artificial intelligence algorithm for decision-making. …”

Study design and deep-learning model architecture. by Sehoon Park (1466026)

“…Conv, Convolutional layer; SepConv, Separable convolutional layer; MBConv, Mobile inverted bottleneck convolutional layer (numbers after MBConv indicate layer depth); k3/k5, kernel size 3 or 5; GAP, Global average pooling; FC, Fully connected layer; Swish, Swish activation function; DBP, Diastolic blood pressure, SBP, Systolic blood pressure; HR, Heart rate; DL-IVSS, A deep-learning algorithm leveraging time-series intraoperative vital sign signals; preOp ML, A machine learning model with 103 baseline characteristics.…”

Mechanomics Code - JVT by Carlo Vittorio Cannistraci (5854046)

“…The functions were tested respectively in: MATLAB 2018a or youger, Python 3.9.4, R 4.0.3.…”

Table 1_Kefir and healthy aging: revealing thematic gaps through AI-assisted screening and semantic evidence mapping.docx by Francesco Chiani (2661328)

“…To overcome this fragmentation, we applied an integrative approach that combines a cutting-edge AI-assisted algorithm for evidence screening with a Python-based semantic clustering pipeline. …”

Table 2_Kefir and healthy aging: revealing thematic gaps through AI-assisted screening and semantic evidence mapping.docx by Francesco Chiani (2661328)

“…To overcome this fragmentation, we applied an integrative approach that combines a cutting-edge AI-assisted algorithm for evidence screening with a Python-based semantic clustering pipeline. …”

Table 3_Kefir and healthy aging: revealing thematic gaps through AI-assisted screening and semantic evidence mapping.xlsx by Francesco Chiani (2661328)

“…To overcome this fragmentation, we applied an integrative approach that combines a cutting-edge AI-assisted algorithm for evidence screening with a Python-based semantic clustering pipeline. …”

Table 4_Kefir and healthy aging: revealing thematic gaps through AI-assisted screening and semantic evidence mapping.docx by Francesco Chiani (2661328)

“…To overcome this fragmentation, we applied an integrative approach that combines a cutting-edge AI-assisted algorithm for evidence screening with a Python-based semantic clustering pipeline. …”

Seamless integration of legacy robotic systems into a self-driving laboratory via NIMO: a case study on liquid handler automation by Ryo Tamura (1957942)

“…We developed NIMO (formerly NIMS-OS, NIMS Orchestration System), an OS explicitly designed to integrate multiple artificial intelligence (AI) algorithms with diverse exploratory objectives. NIMO provides a framework for integrating AI into robotic experimental systems that are controlled by other OS platforms based on both Python and non-Python languages. …”

Predictive Analysis of Mushroom Toxicity Based Exclusively on Their Natural Habitat. by Enrico Bertozzi (22461709)

“…The analysis was conducted in a Jupyter Notebook environment, using Python and libraries such as Scikit-learn and Pandas. …”

Table1_Enhanced classification and severity prediction of major depressive disorder using acoustic features and machine learning.pdf by Lijuan Liang (4277053)

“…We used the Covarep open-source algorithm to extract a total of 1200 high-level statistical functions for each sample. …”

GameOfLife Prediction Dataset by David Towers (12857447)

“…Excluding 0, the lower numbers also get increasingly unlikely, though more likely than higher numbers, we wanted to prevent gaps and therefore limited to 25 contiguous classes</p><p dir="ltr">NumPy (.npy) files can be opened through the NumPy Python library, using the `numpy.load()` function by inputting the path to the file into the function as a parameter. …”

Image 7_Transcriptomic profiling of diabetic retinopathy: insights into RPL11 and bisphenol A.jpeg by Jian Zhang (1682)

“…To validate the core gene, we conducted Gene Set Enrichment Analysis (GSEA, fgsea R package, version 1.35.8), immune cell infiltration profiling (CIBERSORT algorithm, version 1.03), molecular docking (AutoDock Vina, version 1.2.0), and molecular dynamics simulations (GROMACS, version 2022.4).…”

Image 5_Transcriptomic profiling of diabetic retinopathy: insights into RPL11 and bisphenol A.jpeg by Jian Zhang (1682)

“…To validate the core gene, we conducted Gene Set Enrichment Analysis (GSEA, fgsea R package, version 1.35.8), immune cell infiltration profiling (CIBERSORT algorithm, version 1.03), molecular docking (AutoDock Vina, version 1.2.0), and molecular dynamics simulations (GROMACS, version 2022.4).…”