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algorithm python » algorithms within (Expand Search), algorithm both (Expand Search)
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rate function » brain function (Expand Search), a function (Expand Search), gene function (Expand Search)
algorithm python » algorithms within (Expand Search), algorithm both (Expand Search)
algorithm rate » algorithm based (Expand Search), algorithm a (Expand Search), algorithm ai (Expand Search)
rate function » brain function (Expand Search), a function (Expand Search), gene function (Expand Search)
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Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements
Published 2021“…<div>This directory contains Python 3 scripts implementing the Trajectory Adaptive Multilevel Sampling algorithm (TAMS), a variant of Adaptive Multilevel Splitting (AMS), for the study of rare events. …”
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BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data
Published 2019“…Despite its importance, no standardized computational platform is currently available to generate species-specific biomass objective functions in a data-driven, unbiased fashion. To fill this gap in the metabolic modeling software ecosystem, we implemented BOFdat, a Python package for the definition of a <b>B</b>iomass <b>O</b>bjective <b>F</b>unction from experimental <b>dat</b>a. …”
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EFGs: A Complete and Accurate Implementation of Ertl’s Functional Group Detection Algorithm in RDKit
Published 2025“…In this paper, a new RDKit/Python implementation of the algorithm is described, that is both accurate and complete. …”
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Random clustering rates and sensitivity of clustering strategies across varying settings.
Published 2025Subjects: -
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Random clustering rates and sensitivity of clustering strategies using the CDR length criterion.
Published 2025Subjects: