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algorithm python » algorithm within (Expand Search), algorithms within (Expand Search), algorithm both (Expand Search)
algorithm time » algorithm i (Expand Search), algorithm ai (Expand Search), algorithm pre (Expand Search)
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Comparison of scores obtained by our interpenetration and scoring algorithm (ISA) and ROSETTA for a subset of structures.
Published 2023“…However, our algorithm was 1000 times faster than pyROSETTA (both algorithms have been parallelized on a per-structure basis using the Python package joblib [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1010531#pcbi.1010531.ref069" target="_blank">69</a>]).…”
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Antibody challenge outcomes.
Published 2019“…<p>(A): Evaluation metric used for Antibody Clustering as a function of time (<i>t</i> measured in units of <i>t</i><sub>0</sub> = 100ms) and accuracy (<i>ACC</i>), as determined during the competition. …”
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<b>AI for imaging plant stress in invasive species </b>(dataset from the article https://doi.org/10.1093/aob/mcaf043)
Published 2025“…</li><li>The dataframe of extracted colour features from all leaf images and lab variables (ecophysiological predictors and variables to be predicted)</li><li>Set of scripts used for image pre-processing, features extraction, data analytsis, visualization and Machine learning algorithms training, using ImageJ, R and Python.</li></ol><p dir="ltr">Read the <b>readMe.txt </b>to find detailed information of each file.…”
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GridScopeRodents: High-Resolution Global Typical Rodents Distribution Projections from 2021 to 2100 under Diverse SSP-RCP Scenarios
Published 2025“…High-resolution global distribution projections of 10 rodent genera under diverse SSP–RCP scenarios, 2021–2100. <i>Sci Data</i> <b>12</b>, 1467 (2025). <a href="https://doi.org/10.1038/s41597-025-05793-0" rel="noreferrer nofollow noopener" target="_blank">https://doi.org/10.1038/s41597-025-05793-0</a></p><p dir="ltr">Understanding the potential impact of climate change on species distributions is crucial for biodiversity conservation and ecosystem management. …”
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Barro Colorado Island 50-ha plot aerial photogrammetry orthomosaics and digital surface models for 2018-2023: Globally and locally aligned time series.
Published 2023“…The local alignment algorithms at times produced distortions which have the potential to remove some of the signals of interest (e.g., obscuring tree crown growth or damage, as the edges of crowns are aligned across dates). …”
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Spatiotemporal Soil Erosion Dataset for the Yarlung Tsangpo River Basin (1990–2100)
Published 2025“…Bias correction was conducted using a 25-year baseline (1990–2014), with adjustments made monthly to correct for seasonal biases. The corrected bias functions were then applied to adjust the years (2020–2100) of daily rainfall data using the "ibicus" package, an open-source Python tool for bias adjustment and climate model evaluation. …”
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Decoding fairness motivations - repository
Published 2020“…</div><div>To obtain neural activation patterns for multivariate analysis individual time series were modeled using a double γ hemodynamic response function in a single trial GLM design using FSL’s FEAT. …”
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Code
Published 2025“…</p><p><br></p><p dir="ltr"><b>RNA functional analysis</b></p><p dir="ltr">Gene Ontology (GO) analysis was performed using the Metascape website, and gene set enrichment analysis (GSEA) was conducted using the GSEABase and enrichplot packages in R. …”
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Core data
Published 2025“…</p><p><br></p><p dir="ltr"><b>RNA functional analysis</b></p><p dir="ltr">Gene Ontology (GO) analysis was performed using the Metascape website, and gene set enrichment analysis (GSEA) was conducted using the GSEABase and enrichplot packages in R. …”