Image 1_Constructing a neutrophil extracellular trap model based on machine learning to predict clinical outcomes and immune therapy responses in oral squamous cell carcinoma.tif by Jian Wang (5901)

“…Six machine learning algorithms were employed for model training, with the best model selected based on 1-year, 3-year, and 5-year AUC values. …”

Table 2_Single-cell sequencing reveals the role of aggrephagy-related patterns in tumor microenvironment, prognosis and immunotherapy in endometrial cancer.docx by Yuquan Yuan (10570747)

“…However, aggrephagy functions within the tumor microenvironment (TME) in endometrial cancer (EC) remain to be elucidated.…”

Table 2_Constructing a neutrophil extracellular trap model based on machine learning to predict clinical outcomes and immune therapy responses in oral squamous cell carcinoma.xlsx by Jian Wang (5901)

“…Six machine learning algorithms were employed for model training, with the best model selected based on 1-year, 3-year, and 5-year AUC values. …”

A Smoothed-Bayesian Approach to Frequency Recovery from Sketched Data by Mario Beraha (11669142)

“…For sketches obtained with a single hash function, our approach is supported by precise theoretical guarantees, including unbiasedness and optimality under a Bayesian framework within an intuitive class of linear estimators. …”

Table 1_CytoLNCpred-a computational method for predicting cytoplasm associated long non-coding RNAs in 15 cell-lines.xlsx by Shubham Choudhury (9192026)

“…<p>The function of long non-coding RNA (lncRNA) is largely determined by its specific location within a cell. …”

Table 1_Identification and validation of immune and diagnostic biomarkers for interstitial cystitis/painful bladder syndrome by integrating bioinformatics and machine-learning.docx by Tao Zhou (117050)

“…Hub genes in IC/BPS patients were identified through the application of three distinct machine-learning algorithms. Additionally, the inflammatory status and immune landscape of IC/BPS patients were evaluated using the ssGSEA algorithm. …”

Data Sheet 1_Identification of key biomarkers related to fibrocartilage chondrocytes for osteoarthritis based on bulk, single-cell transcriptomic data.docx by Bailin Pan (20300112)

“…Microarray data were integrated to identify differentially expressed genes (DEGs). We conducted functional-enrichment analyses, including Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO), and used weighted gene co-expression network analysis (WGCNA) and the least absolute shrinkage and selection operator (LASSO) algorithm to select biomarkers. …”

Data Sheet 2_Identification of key biomarkers related to fibrocartilage chondrocytes for osteoarthritis based on bulk, single-cell transcriptomic data.csv by Bailin Pan (20300112)

“…Microarray data were integrated to identify differentially expressed genes (DEGs). We conducted functional-enrichment analyses, including Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO), and used weighted gene co-expression network analysis (WGCNA) and the least absolute shrinkage and selection operator (LASSO) algorithm to select biomarkers. …”

Table 1_A novel prognostic signature identifies MFAP4 as a tumor suppressor linking the tumor microenvironment to PI3K/AKT signaling in triple-negative breast cancer.docx by Xiaoqin Yu (3918377)

“…The model’s association with TME characteristics was assessed using ESTIMATE algorithm and immune infiltration analyses. The biological functions of the key gene, Microfibril Associated Protein 4 (MFAP4), were investigated in vitro via proliferation and migration assays. …”

Table 2_A novel prognostic signature identifies MFAP4 as a tumor suppressor linking the tumor microenvironment to PI3K/AKT signaling in triple-negative breast cancer.xlsx by Xiaoqin Yu (3918377)

“…The model’s association with TME characteristics was assessed using ESTIMATE algorithm and immune infiltration analyses. The biological functions of the key gene, Microfibril Associated Protein 4 (MFAP4), were investigated in vitro via proliferation and migration assays. …”

Data Sheet 1_A novel prognostic signature identifies MFAP4 as a tumor suppressor linking the tumor microenvironment to PI3K/AKT signaling in triple-negative breast cancer.pdf by Xiaoqin Yu (3918377)

“…The model’s association with TME characteristics was assessed using ESTIMATE algorithm and immune infiltration analyses. The biological functions of the key gene, Microfibril Associated Protein 4 (MFAP4), were investigated in vitro via proliferation and migration assays. …”

Table 1_The analysis of gene co-expression network and immune infiltration revealed biomarkers between triple-negative and non-triple negative breast cancer.xlsx by Yao Yi (459571)

“…CIBERSORT analysis was used to characterize the composition of immune cells within complex tissues based on gene expression data, typically derived from bulk RNA sequencing or microarray datasets. …”

Image 1_The analysis of gene co-expression network and immune infiltration revealed biomarkers between triple-negative and non-triple negative breast cancer.tif by Yao Yi (459571)

“…CIBERSORT analysis was used to characterize the composition of immune cells within complex tissues based on gene expression data, typically derived from bulk RNA sequencing or microarray datasets. …”

Image 3_The analysis of gene co-expression network and immune infiltration revealed biomarkers between triple-negative and non-triple negative breast cancer.tif by Yao Yi (459571)

“…CIBERSORT analysis was used to characterize the composition of immune cells within complex tissues based on gene expression data, typically derived from bulk RNA sequencing or microarray datasets. …”

Image 2_The analysis of gene co-expression network and immune infiltration revealed biomarkers between triple-negative and non-triple negative breast cancer.tif by Yao Yi (459571)

“…CIBERSORT analysis was used to characterize the composition of immune cells within complex tissues based on gene expression data, typically derived from bulk RNA sequencing or microarray datasets. …”

Table 2_The analysis of gene co-expression network and immune infiltration revealed biomarkers between triple-negative and non-triple negative breast cancer.xlsx by Yao Yi (459571)

“…CIBERSORT analysis was used to characterize the composition of immune cells within complex tissues based on gene expression data, typically derived from bulk RNA sequencing or microarray datasets. …”

Table 3_The analysis of gene co-expression network and immune infiltration revealed biomarkers between triple-negative and non-triple negative breast cancer.xlsx by Yao Yi (459571)

“…CIBERSORT analysis was used to characterize the composition of immune cells within complex tissues based on gene expression data, typically derived from bulk RNA sequencing or microarray datasets. …”

Image 4_The analysis of gene co-expression network and immune infiltration revealed biomarkers between triple-negative and non-triple negative breast cancer.tif by Yao Yi (459571)

“…CIBERSORT analysis was used to characterize the composition of immune cells within complex tissues based on gene expression data, typically derived from bulk RNA sequencing or microarray datasets. …”

Table 1_Trajectories of health conditions predict cardiovascular disease risk among middle-aged and older adults: a national cohort study.docx by Wenlong Li (571749)

“…Trajectories of multimorbidity status, activities of daily living (ADLs) limitations, body roundness index (BRI), pain, sleep duration, depressive symptoms, and cognitive function were identified using latent class growth models (LCGMs). …”

Image 1_Targeting a distinct binding pocket in the pregnane X receptor with natural agonist TRLW-2 ameliorates murine ulcerative colitis.tif by Shangrui Rao (18189241)

“…</p>Methods<p>A distinct binding pocket (Pocket 1–5) within the PXR ligand-binding domain was identified using a multi-algorithm computational approach (SiteMap, Fpocket, Prank, CASTpFold). …”