Effects of Class Imbalance and Data Scarcity on the Performance of Binary Classification Machine Learning Models Developed Based on ToxCast/Tox21 Assay Data by Changhun Kim (682542)

“…An assay matrix based on CI and DS was prepared for 335 assays with biologically intended target information, and 28 CI assays and 3 DS assays were selected. …”

Reproducing kernel-based semiparametric functional smoothed score estimation with binary responses by Meichen Liu (8168148)

Calibration curves for the test set of four models. by Meng Cao (105914)

Subjects:

SHAP bar plot. by Meng Cao (105914)

Subjects:

ROC curves for the test set of four models. by Meng Cao (105914)

Subjects:

Display of the web prediction interface. by Meng Cao (105914)

Subjects:

Sample screening flowchart. by Meng Cao (105914)

Subjects:

Descriptive statistics for variables. by Meng Cao (105914)

Subjects:

SHAP summary plot. by Meng Cao (105914)

Subjects:

Performance metrics of the models on the training and test set. by Meng Cao (105914)

Subjects:

Testing algorithm for modified 2-tiered approaches to Lyme disease diagnosis. by Richard Porwancher (11413931)

<i>hi</i>PRS algorithm process flow. by Michela C. Massi (14599915)

Schematic representation of semi-automated algorithm for organoids analyzing. by Anna Demchenko (18449439)

Identification and quantitation of clinically relevant microbes in patient samples: Comparison of three k-mer based classifiers for speed, accuracy, and sensitivity by George S. Watts (7962206)

“…We tested the accuracy, sensitivity, and resource requirements of three top metagenomic taxonomic classifiers that use fast k-mer based algorithms: Centrifuge, CLARK, and KrakenUniq. …”

Random forest model performs better than support vector machine algorithms and when it primarily uses spontaneous photopic ERG of 60-s duration in humans. by Ramsés Noguez Imm (6658637)

Multicategory Angle-Based Learning for Estimating Optimal Dynamic Treatment Regimes With Censored Data by Fei Xue (24567)

“…In this article, we develop a novel angle-based approach to search the optimal DTR under a multicategory treatment framework for survival data. …”

Spontaneous ERG-based random forest model discriminates control and disease cases in rodent models of obesity and type 1 diabetes and predicts disease evolution in the type 1 diabe... by Ramsés Noguez Imm (6658637)

Predictive Analysis of Mushroom Toxicity Based Exclusively on Their Natural Habitat. by Enrico Bertozzi (22461709)

“…Model evaluation was based on accuracy metrics and qualitative analysis of the confusion matrix.. …”

Machine Learning-Ready Dataset for Cytotoxicity Prediction of Metal Oxide Nanoparticles by Soham Savarkar (21811825)

“…</p><p dir="ltr">These biological metrics were used to define a binary toxicity label: entries were classified as toxic (1) or non-toxic (0) based on thresholds from standardized guidelines (e.g., ISO 10993-5:2009) and literature consensus. …”