Table 1_A computational framework for optimizing mRNA vaccine delivery via AI-guided nanoparticle design and in silico gene expression profiling.pdf حسب Valentina Di Salvatore (6296114)

"…Differential gene expression analysis identified compartment-specific transcriptional responses, which were then used to construct a risk index based on predicted immune activation and the number of upregulated immune markers. …"

Presentation 1_A computational framework for optimizing mRNA vaccine delivery via AI-guided nanoparticle design and in silico gene expression profiling.pdf حسب Valentina Di Salvatore (6296114)

"…Differential gene expression analysis identified compartment-specific transcriptional responses, which were then used to construct a risk index based on predicted immune activation and the number of upregulated immune markers. …"

Table 2_A computational framework for optimizing mRNA vaccine delivery via AI-guided nanoparticle design and in silico gene expression profiling.pdf حسب Valentina Di Salvatore (6296114)

"…Differential gene expression analysis identified compartment-specific transcriptional responses, which were then used to construct a risk index based on predicted immune activation and the number of upregulated immune markers. …"

Image 1_A computational framework for optimizing mRNA vaccine delivery via AI-guided nanoparticle design and in silico gene expression profiling.png حسب Valentina Di Salvatore (6296114)

"…Differential gene expression analysis identified compartment-specific transcriptional responses, which were then used to construct a risk index based on predicted immune activation and the number of upregulated immune markers. …"

Image 2_A computational framework for optimizing mRNA vaccine delivery via AI-guided nanoparticle design and in silico gene expression profiling.png حسب Valentina Di Salvatore (6296114)

"…Differential gene expression analysis identified compartment-specific transcriptional responses, which were then used to construct a risk index based on predicted immune activation and the number of upregulated immune markers. …"

MultiCRISPR-EGA: Optimizing Guide RNA Array Design for Multiplexed CRISPR Using the Elitist Genetic Algorithm حسب Yangyu Zhang (4609117)

"…Computational experiments on Escherichia coli gene targets demonstrate that the EGA can rapidly optimize multiplexed gRNA arrays, outperforming other intelligent optimization algorithms in CRISPR interference (CRISPRi) applications, while the GUI provides real-time design progress control and compatibility with various CRISPR-Cas systems. …"

Optimal image settings for object detection of Iba1 immunolabelled cells in DAB. حسب Danish M. Anwer (15383441)

LASSO-Cox Regression Analysis to Screen Prognosis-Related Genes. حسب Jie Chu (293795)

Raw Data for the Thesis: "<i>Enhancing RNAi-Based Pest Control through Effective Target Gene Selection and Optimal dsRNA Design</i>" حسب Doga CEDDEN (12675286)

"…The results revealed moderate transferability (~50%) of highly effective targets from <i>T. castaneum</i>, which increased to approximately 80% when considering genes already validated in other leaf beetles. These findings are both conceptually important, in demonstrating partial but significant cross-species transferability of RNAi targets, and practically valuable for guiding the development of RNAi-based solutions against this important pest.…"

<i>OptRAM</i>: <i>In-silico</i> strain design via integrative regulatory-metabolic network modeling حسب Fangzhou Shen (5140994)

"…To address challenges in metabolic engineering, computational strain optimization algorithms based on genome-scale metabolic models have increasingly been used to aid in overproducing products of interest. …"

Establishment of MPM. حسب Amir Abbas Navidinia (21656136)

Table1_Study of PARP inhibitors for breast cancer based on enhanced multiple kernel function SVR with PSO.docx حسب Haohan Xue (17892128)

"…The problem of multi-parameter optimization introduced in the support vector regression model was solved by the particle swarm optimization algorithm. …"

Table1_Identification of Immune-Related Genes for Risk Stratification in Multiple Myeloma Based on Whole Bone Marrow Gene Expression Profiling.XLSX حسب Qiang-Sheng Wang (12641971)

"…Tumor immunotherapy, a new therapy that has emerged in recent years, offers hope to patients, and studying the expression characteristics of immune-related genes (IRGs) based on whole bone marrow gene expression profiling (GEP) in MM patients can help guide personalized immunotherapy.…"

Image2_Identification of Immune-Related Genes for Risk Stratification in Multiple Myeloma Based on Whole Bone Marrow Gene Expression Profiling.TIFF حسب Qiang-Sheng Wang (12641971)

"…Tumor immunotherapy, a new therapy that has emerged in recent years, offers hope to patients, and studying the expression characteristics of immune-related genes (IRGs) based on whole bone marrow gene expression profiling (GEP) in MM patients can help guide personalized immunotherapy.…"

Image1_Identification of Immune-Related Genes for Risk Stratification in Multiple Myeloma Based on Whole Bone Marrow Gene Expression Profiling.TIFF حسب Qiang-Sheng Wang (12641971)

"…Tumor immunotherapy, a new therapy that has emerged in recent years, offers hope to patients, and studying the expression characteristics of immune-related genes (IRGs) based on whole bone marrow gene expression profiling (GEP) in MM patients can help guide personalized immunotherapy.…"

BOFdat Step 3: Identifying species-specific metabolic end goals. حسب Jean-Christophe Lachance (6619307)

DataSheet1_Study of PARP inhibitors for breast cancer based on enhanced multiple kernel function SVR with PSO.ZIP حسب Haohan Xue (17892128)

"…The problem of multi-parameter optimization introduced in the support vector regression model was solved by the particle swarm optimization algorithm. …"

Table1_Computational prediction of allergenic proteins based on multi-feature fusion.DOCX حسب Bin Liu (5899)

Data Sheet 1_Clinical potential and experimental validation of prognostic genes in hepatocellular carcinoma revealed by risk modeling utilizing single cell and transcriptome constr... حسب Hang Deng (1664668)

"…</p>Methods<p>The HCC datasets were obtained from public databases and then differential expression analysis were used to obtain significant gene expression profiles. Subsequently, univariate Cox regression analysis and PH assumption test were performed, and a risk model was developed using an optimal algorithm from 101 combinations on the TCGA-LIHC dataset to pinpoint prognostic genes. …"

Image_7_A Prognostic Model for Acute Myeloid Leukemia Based on IL-2/STAT5 Pathway-Related Genes.tif حسب Yigang Tang (12031964)

"…Through Cox proportional-hazards regression model and stepwise algorithm, we constructed a six-gene STAT5-associated signature based on the most robustly survival-related genes related to the IL-2/STAT5 signaling pathway. …"