<i>hi</i>PRS algorithm process flow. by Michela C. Massi (14599915)

“…<b>(B)</b> Focusing on the positive class only, the algorithm exploits FIM (<i>apriori</i> algorithm) to build a list of candidate interactions of any desired order, retaining those that have an empirical frequency above a given threshold <i>δ</i>. …”

The workflow diagram for the gene expression biomarker study which involve using principal component analysis (PCA) to reduce the number of features (principal components), thus re... by Aninda Astuti (21736334)

Supplementary Material for: Penalized Logistic Regression Analysis for Genetic Association Studies of Binary Phenotypes by Yu Y. (3096192)

Algoritmo de clasificación de expresiones de odio por tipos en español (Algorithm for classifying hate expressions by type in Spanish) by Daniel Pérez Palau (11097348)

“…</p><h2>Model Architecture</h2><p dir="ltr">The model is based on <code>pysentimiento/robertuito-base-uncased</code> with the following modifications:</p><ul><li>A dense classification layer was added over the base model</li><li>Uses input IDs and attention masks as inputs</li><li>Generates a multi-class classification with 5 hate categories</li></ul><h2>Dataset</h2><p dir="ltr"><b>HATEMEDIA Dataset</b>: Custom hate speech dataset with categorization by type:</p><ul><li><b>Labels</b>: 5 hate type categories (0-4)</li><li><b>Preprocessing</b>:</li><li>Null values ​​removed from text and labels</li><li>Reindexing and relabeling (original labels are adjusted by subtracting 1)</li><li>Exclusion of category 2 during training</li><li>Conversion of category 5 to category 2</li></ul><h2>Training Process</h2><h3>Configuration</h3><ul><li><b>Batch size</b>: 128</li><li><b>Epoches</b>: 5</li><li><b>Learning rate</b>: 2e-5 with 10% warmup steps</li><li><b>Early stopping</b> with patience=2</li><li><b>Class weights</b>: Balanced to handle class imbalance</li></ul><h3>Custom Metrics</h3><ul><li>Recall for specific classes (focus on class 2)</li><li>Precision for specific classes (focus on class 3)</li><li>F1-score (weighted)</li><li>AUC-PR</li><li>Recall at precision=0.6 (class 3)</li><li>Precision at recall=0.6 (class 2)</li></ul><h2>Evaluation Metrics</h2><p dir="ltr">The model is evaluated using:</p><ul><li>Macro recall, precision, and F1-score</li><li>One-vs-Rest AUC</li><li>Accuracy</li><li>Per-class metrics</li><li>Confusion matrix</li><li>Full classification report</li></ul><h2>Technical Features</h2><h3>Data Preprocessing</h3><ul><li><b>Tokenization</b>: Maximum length of 128 tokens (truncation and padding)</li><li><b>Encoding of labels</b>: One-hot encoding for multi-class classification</li><li><b>Data split</b>: 80% training, 10% validation, 10% testing</li></ul><h3>Optimization</h3><ul><li><b>Optimizer</b>: Adam with linear warmup scheduling</li><li><b>Loss function</b>: Categorical Crossentropy (from_logits=True)</li><li><b>Imbalance handling</b>: Class weights computed automatically</li></ul><h2>Requirements</h2><p dir="ltr">The following Python packages are required:</p><ul><li>TensorFlow</li><li>Transformers</li><li>scikit-learn</li><li>pandas</li><li>datasets</li><li>matplotlib</li><li>seaborn</li><li>numpy</li></ul><h2>Usage</h2><ol><li><b>Data format</b>:</li></ol><ul><li>CSV file or Pandas DataFrame</li><li>Required column name: <code>text</code> (string type)</li><li>Required column name: Data type label (integer type, 0-4) - optional for evaluation</li></ul><ol><li><b>Text preprocessing</b>:</li></ol><ul><li>Automatic tokenization with a maximum length of 128 tokens</li><li>Long texts will be automatically truncated</li><li>Handling of special characters, URLs, and emojis included</li></ul><ol><li><b>Label encoding</b>:</li></ol><ul><li>The model classifies hate speech into 5 categories (0-4)</li><li><code>0</code>: Political hatred: Expressions directed against individuals or groups based on political orientation.…”

PathOlOgics_RBCs Python Scripts.zip by Ahmed Elsafty (16943883)

“…The aforementioned measurement was utilized to preliminary identify RBCs with a pear-shaped appearance, which included teardrop-shaped RBCs, ovalocytes with an egg-shape, borderline ovalocytes with an egg-shape, and false teardrop-shaped RBCs in the angled RBCs class.</p><p><br></p><p dir="ltr">In the fifth measurement technique, the numbers of sharp <b>surface projections/protrusions</b> were calculated by initially applying Canny's edge detection algorithm to generate an edge map of the cell mask image. …”

Supplementary Material 8 by Nishitha R Kumar (19750617)

“…</li><li><b>XGboost: </b>An optimized gradient boosting algorithm that efficiently handles large genomic datasets, commonly used for high-accuracy predictions in <i>E. coli</i> classification.…”

Machine Learning-Ready Dataset for Cytotoxicity Prediction of Metal Oxide Nanoparticles by Soham Savarkar (21811825)

“…</p><p dir="ltr"><b>Applications and Model Compatibility:</b></p><p dir="ltr">The dataset is optimized for use in supervised learning workflows and has been tested with algorithms such as:</p><p dir="ltr">Gradient Boosting Machines (GBM),</p><p dir="ltr">Support Vector Machines (SVM-RBF),</p><p dir="ltr">Random Forests, and</p><p dir="ltr">Principal Component Analysis (PCA) for feature reduction.…”