Secure MANET routing with blockchain-enhanced latent encoder coupled GANs and BEPO optimization by Sandeep Jagonda Patil (22048337)

“…By integrating Latent Encoder Coupled Generative Adversarial Network (LEGAN) optimized with Binary Emperor Penguin optimizer (BEPO), the scheme enhances routing efficiency and security. …”

Microsoft excel file containing exhaustive list of Abbreviated-Injury Scale codes used to generate binary variables encoding the presence or absence of injury to various body regio... by Michael D. Cobler-Lichter (22492930)

DataSheet2_Disordered–Ordered Protein Binary Classification by Circular Dichroism Spectroscopy.PDF by András Micsonai (801004)

“…Even without providing high-resolution information, it is especially useful when NMR, X-ray, or other techniques are problematic or one simply needs a fast technique to verify the structure of proteins. Here, we propose an automatized binary disorder–order classification method by analyzing far-UV CD spectroscopy data. …”

DataSheet3_Disordered–Ordered Protein Binary Classification by Circular Dichroism Spectroscopy.xlsx by András Micsonai (801004)

“…Even without providing high-resolution information, it is especially useful when NMR, X-ray, or other techniques are problematic or one simply needs a fast technique to verify the structure of proteins. Here, we propose an automatized binary disorder–order classification method by analyzing far-UV CD spectroscopy data. …”

DataSheet1_Disordered–Ordered Protein Binary Classification by Circular Dichroism Spectroscopy.PDF by András Micsonai (801004)

“…Even without providing high-resolution information, it is especially useful when NMR, X-ray, or other techniques are problematic or one simply needs a fast technique to verify the structure of proteins. Here, we propose an automatized binary disorder–order classification method by analyzing far-UV CD spectroscopy data. …”

2025-01-14 - PAG Talk - Kmerseek - Olga Botvinnik - Seanome by Olga Botvinnik (20571431)

Data_Sheet_1_Crystal Structure Prediction of Binary Alloys via Deep Potential.PDF by Haidi Wang (9694004)

<i>hi</i>PRS algorithm process flow. by Michela C. Massi (14599915)

“…<b>(C)</b> The whole training data is then scanned, searching for these sequences and deriving a re-encoded dataset where interaction terms are binary features (i.e., 1 if sequence <i>i</i> is observed in <i>j</i>-th patient genotype, 0 otherwise). …”

The illustration depicts our CQ-CNN architecture for binary image classification. by Mominul Islam (3513758)

The workflow diagram for the gene expression biomarker study which involve using principal component analysis (PCA) to reduce the number of features (principal components), thus re... by Aninda Astuti (21736334)

Predicting Thermal Decomposition Temperature of Binary Imidazolium Ionic Liquid Mixtures from Molecular Structures by Hongpeng He (348094)

“…This study is devoted to develop a quantitative structure–property relationship model for predicting the <i>T</i>_d,_5%onset of binary imidazolium IL mixtures. Both in silico design and data analysis descriptors and norm index were employed to encode the structural characteristics of binary IL mixtures. …”

Data_Sheet_1_Alzheimer’s Disease Diagnosis and Biomarker Analysis Using Resting-State Functional MRI Functional Brain Network With Multi-Measures Features and Hippocampal Subfield... by Uttam Khatri (12689072)

Data generation process. by Nicola Dietler (12551766)

Algoritmo de clasificación de expresiones de odio por tipos en español (Algorithm for classifying hate expressions by type in Spanish) by Daniel Pérez Palau (11097348)

“…</p><h2>Model Architecture</h2><p dir="ltr">The model is based on <code>pysentimiento/robertuito-base-uncased</code> with the following modifications:</p><ul><li>A dense classification layer was added over the base model</li><li>Uses input IDs and attention masks as inputs</li><li>Generates a multi-class classification with 5 hate categories</li></ul><h2>Dataset</h2><p dir="ltr"><b>HATEMEDIA Dataset</b>: Custom hate speech dataset with categorization by type:</p><ul><li><b>Labels</b>: 5 hate type categories (0-4)</li><li><b>Preprocessing</b>:</li><li>Null values ​​removed from text and labels</li><li>Reindexing and relabeling (original labels are adjusted by subtracting 1)</li><li>Exclusion of category 2 during training</li><li>Conversion of category 5 to category 2</li></ul><h2>Training Process</h2><h3>Configuration</h3><ul><li><b>Batch size</b>: 128</li><li><b>Epoches</b>: 5</li><li><b>Learning rate</b>: 2e-5 with 10% warmup steps</li><li><b>Early stopping</b> with patience=2</li><li><b>Class weights</b>: Balanced to handle class imbalance</li></ul><h3>Custom Metrics</h3><ul><li>Recall for specific classes (focus on class 2)</li><li>Precision for specific classes (focus on class 3)</li><li>F1-score (weighted)</li><li>AUC-PR</li><li>Recall at precision=0.6 (class 3)</li><li>Precision at recall=0.6 (class 2)</li></ul><h2>Evaluation Metrics</h2><p dir="ltr">The model is evaluated using:</p><ul><li>Macro recall, precision, and F1-score</li><li>One-vs-Rest AUC</li><li>Accuracy</li><li>Per-class metrics</li><li>Confusion matrix</li><li>Full classification report</li></ul><h2>Technical Features</h2><h3>Data Preprocessing</h3><ul><li><b>Tokenization</b>: Maximum length of 128 tokens (truncation and padding)</li><li><b>Encoding of labels</b>: One-hot encoding for multi-class classification</li><li><b>Data split</b>: 80% training, 10% validation, 10% testing</li></ul><h3>Optimization</h3><ul><li><b>Optimizer</b>: Adam with linear warmup scheduling</li><li><b>Loss function</b>: Categorical Crossentropy (from_logits=True)</li><li><b>Imbalance handling</b>: Class weights computed automatically</li></ul><h2>Requirements</h2><p dir="ltr">The following Python packages are required:</p><ul><li>TensorFlow</li><li>Transformers</li><li>scikit-learn</li><li>pandas</li><li>datasets</li><li>matplotlib</li><li>seaborn</li><li>numpy</li></ul><h2>Usage</h2><ol><li><b>Data format</b>:</li></ol><ul><li>CSV file or Pandas DataFrame</li><li>Required column name: <code>text</code> (string type)</li><li>Required column name: Data type label (integer type, 0-4) - optional for evaluation</li></ul><ol><li><b>Text preprocessing</b>:</li></ol><ul><li>Automatic tokenization with a maximum length of 128 tokens</li><li>Long texts will be automatically truncated</li><li>Handling of special characters, URLs, and emojis included</li></ul><ol><li><b>Label encoding</b>:</li></ol><ul><li>The model classifies hate speech into 5 categories (0-4)</li><li><code>0</code>: Political hatred: Expressions directed against individuals or groups based on political orientation.…”

Influence of underlying networks on the performance of Graph CNNs trained gene expression data. by Halima Alachram (11570633)

Influence of underlying networks on the performance of Graph CNNs trained gene expression data. by Halima Alachram (11570633)

Influence of underlying networks on the performance of Graph CNNs trained gene expression data. by Halima Alachram (11570633)

Influence of underlying networks on the performance of Graph-CNNs trained gene expression data. by Halima Alachram (11570633)

DataSheet1_Nucleotide-level prediction of CircRNA-protein binding based on fully convolutional neural network.PDF by Zhen Shen (393133)

Flowchart of the entire pipeline. by Andreas Denger (12111159)

“…Then, the protein feature generation algorithms described in our previous study [<a href="http://www.plosone.org/article/info:doi/10.1371/journal.pone.0315330#pone.0315330.ref022" target="_blank">22</a>] are applied to the data, and pairwise ML models are trained and evaluated (see Section Evaluation of pairwise machine learning models). …”