Effects of Class Imbalance and Data Scarcity on the Performance of Binary Classification Machine Learning Models Developed Based on ToxCast/Tox21 Assay Data by Changhun Kim (682542)

“…An assay matrix based on CI and DS was prepared for 335 assays with biologically intended target information, and 28 CI assays and 3 DS assays were selected. Thirty models established by combining five molecular fingerprints (i.e., Morgan, MACCS, RDKit, Pattern, and Layered) and six algorithms [i.e., gradient boosting tree, random forest (RF), multi-layered perceptron, <i>k</i>-nearest neighbor, logistic regression, and naive Bayes] were trained using the selected assay data set. …”

RMSE on the test data when fitting (logistic) quadratic models to binary data across increasing measurement error values . by Jakub Stoklosa (3315042)

<i>hi</i>PRS algorithm process flow. by Michela C. Massi (14599915)

“…<b>(C)</b> The whole training data is then scanned, searching for these sequences and deriving a re-encoded dataset where interaction terms are binary features (i.e., 1 if sequence <i>i</i> is observed in <i>j</i>-th patient genotype, 0 otherwise). …”

Experimental observation of gastruloids and shape quantification using LOCO-EFA. by Martijn A. de Jong (17896732)

UK Biobank data wrangling statistics and results. by Simeone Marino (81051)

Fig 1 - by Jakub Stoklosa (3315042)

Segmentation, trace denoising and spike extraction framework. by Changjia Cai (10647521)

Natural language processing for automated quantification of bone metastases reported in free-text bone scintigraphy reports by Olivier Q. Groot (9370461)

“…The aim of this study was to develop a natural language processing (NLP) algorithm for binary classification (single metastasis versus two or more metastases) in bone scintigraphy reports of patients undergoing surgery for bone metastases.…”

Supplementary Material 8 by Nishitha R Kumar (19750617)

“…</p><p dir="ltr">When applied to AMR prediction, SMOTE enhances the ability of classification models to accurately identify resistant <i>Escherichia coli</i> strains by balancing the dataset, ensuring that machine learning algorithms do not overlook rare resistance patterns. …”

Data_Sheet_1_Multiclass Classification Based on Combined Motor Imageries.pdf by Cecilia Lindig-León (7889777)

“…In this way, for each binary problem, the CSP algorithm produces features to determine if the specific body part is engaged in the task or not. …”

DataSheet_1_Near infrared spectroscopy for cooking time classification of cassava genotypes.docx by Massaine Bandeira e Sousa (7866242)

“…Classification of genotypes was carried out using the K-nearest neighbor algorithm (KNN) and partial least squares (PLS) models. …”

Table_1_Near infrared spectroscopy for cooking time classification of cassava genotypes.docx by Massaine Bandeira e Sousa (7866242)

“…Classification of genotypes was carried out using the K-nearest neighbor algorithm (KNN) and partial least squares (PLS) models. …”

PathOlOgics_RBCs Python Scripts.zip by Ahmed Elsafty (16943883)

“…</p><p dir="ltr">In terms of classification, a second algorithm was developed and employed to preliminary sort or group the individual cells (after excluding the overlapping cells manually) into different categories using five geometric measurements applied to the extracted contour from each binary image mask (see PathOlOgics_script_2; preliminary shape measurements). …”

DataSheet_1_Multi-Parametric MRI-Based Radiomics Models for Predicting Molecular Subtype and Androgen Receptor Expression in Breast Cancer.docx by Yuhong Huang (115702)

“…We applied several feature selection strategies including the least absolute shrinkage and selection operator (LASSO), and recursive feature elimination (RFE), the maximum relevance minimum redundancy (mRMR), Boruta and Pearson correlation analysis, to select the most optimal features. …”

Machine Learning-Ready Dataset for Cytotoxicity Prediction of Metal Oxide Nanoparticles by Soham Savarkar (21811825)

“…</p><p dir="ltr"><b>Applications and Model Compatibility:</b></p><p dir="ltr">The dataset is optimized for use in supervised learning workflows and has been tested with algorithms such as:</p><p dir="ltr">Gradient Boosting Machines (GBM),</p><p dir="ltr">Support Vector Machines (SVM-RBF),</p><p dir="ltr">Random Forests, and</p><p dir="ltr">Principal Component Analysis (PCA) for feature reduction.…”