Supplementary Material for: Genetical predicted causal relationship between gut microbiota and different types of kidney diseases by figshare admin karger (2628495)

Fig 4 - by Nehal Shawky Nagy (17721213)

“…The Rotenone group shows decreased staining density, while the gonadal extract-treated rotenone group shows increased staining. …”

Supplementary Material for: Words versus strands: Reliability and stability of concordance rates of self-reported and hair-analyzed substance use of young adults over time by Janousch C. (19792158)

Oxidative stress-induced mitochondrial protein degradation and peptide release, iTRAQ data by Jesper Havelund (8348577)

“…The flow of 250 nl/min was delivered and the peptides were separated using a 55 min gradient from 0-38% B buffer before washing with 100% B for 12 min (A buffer: 0.1% formic acid, B buffer: 0.1% formic acid, 90% acetonitrile). …”

Data Sheet 1_Determination of nine prostaglandins in the arachidonic acid metabolic pathway with UHPLC-QQQ-MS/MS and application to in vitro and in vivo inflammation models.docx by Yufeng Huang (782683)

“…Conventional assays typically focus on a single inflammatory indicator, while multi-index detection entails a large number of samples.</p>Methods<p>In this study, an ultra-high-performance liquid chromatography coupled with triple quadrupole mass spectrometry (UHPLC-QQQ-MS/MS) method was newly developed for simultaneous quantitative analysis of nine AA metabolites, including prostaglandin F2β (PGF_2β), prostaglandin E2 (PGE₂), prostaglandin E1 (PGE₁), prostaglandin D1 (PGD₁), prostaglandin D2 (PGD₂), prostaglandin A2 (PGA₂), prostaglandin J2 (PGJ₂), prostaglandin B2 (PGB₂), and prostaglandin A1 (PGA₁), in the supernatant of LPS-induced RAW264.7 cells and the serum samples of adjuvant-induced arthritis (AIA) rats.…”

Supplementary Material for: Leveraging NLP for Psychiatric Phenotyping from Spanish EHR: Enabling the Investigation of Transdiagnostic Symptom Profiles at Scale by figshare admin karger (2628495)

Advantages of our purification method over silica column purification and phenol-chloroform extraction. by Zhe F. Tang (21021785)

“…<p>(A) Sizes of select bands in the 1kb+ ladder for quick reference. (B) Comparing Sanger sequencing read length for pBeloBac11 (New England Biolabs) between QiaPrep Miniprep (QM) and our purification method (Our). …”

Supplementary Material for: Head positioning for stroke blood flow augmentation assisting reperfusion therapies (HEAD-START) study by figshare admin karger (2628495)

Oxidative stress-induced mitochondrial protein degradation and peptide release, Released peptide data by Jesper Havelund (8348577)

“…The flow of 250 nl/min was delivered and the peptides were separated using a 55 min gradient from 0-38% B buffer before washing with 100% B for 12 min (A buffer: 0.1% formic acid, B buffer: 0.1% formic acid, 90% acetonitrile). …”

SEAwise report on the impact of socioeconomic effects of fisheries management adapted according to input from review workshops by Isabella Bitetto (20145735)

“…</p><p dir="ltr">In the <b>Celtic Sea </b>case study<b> (Western Waters case study)</b>, stakeholders questioned the model's assumed rebuilding potential for cod and whiting, citing their likely low productivity under climate stress. …”

<i>Salmonella enterica </i>pangenome graph and variant call data for 539,283 genomes by ADAM RIVERS (18387663)

“…<p dir="ltr"><i>Salmonella</i> pangenome graph and variant call data for 539,283 genomes</p><h3>Description:</h3><p dir="ltr"><i>Salmonella enterica</i> causes human disease and decreases agricultural production. The overall goals of this project is to generate a large database of <i>S. enterica</i> variants with 539,283 samples and 236,069 features for applications in machine learning and genomics. …”

Surface zeta potential and diamond seeding on gallium nitride films by Soumen Mandal (19079480)

“…Through replacement of the substrate and capping of the transistor channel with diamond of thermal conductivity of up to 2000 W/mK, large decreases in the thermal resistance should therefore be achievable allowing full utilisation of the properties of GaN based devices[3].…”

Update on trimethylamine N-oxide (TMAO) as a piezolyte and cryoprotectant: its role in a depth limit for marine fishes and loss from hadal fish during capture by Paul Yancey (14354982)

“…<p dir="ltr"><b>I</b><b>NTRODUCTION</b></p><p dir="ltr">Trimethylamine N-oxide (TMAO) is a small organic molecule found at osmotically-significant concentrations in many marine animal taxa. …”

Over-expression of Fas2 in the wing imaginal disc causes an EGFR-dependent reduction in organ size. by Luis Garcia-Alonso (152388)

“…At right, individual bearing two clones (<i>yellow</i> cuticle, outlined in green), note the large size of the clones and the general reduction of notum size. …”

Tropical fishes can benefit more from novel than familiar species interactions at their cold-range edges by Angus Mitchell (8391018)

“…<p dir="ltr"><b>1.</b><b> </b>Animals extending their biogeographic ranges poleward under global warming often interact with local species for limited resources such as food and shelter. …”

Supplementary file 1_A randomized controlled trial of mindfulness: effects on academic stress, academic burnout, and psychological resilience in university students.docx by Shanwei Chen (12031760)

“…These effects were largely sustained at the 2-week follow-up.</p>Discussion<p>The findings indicate that structured mindfulness training significantly decreases academic stress and burnout while enhancing psychological resilience among Chinese university students. …”

Autophagy induced by mechanical stress sensitizes cells to ferroptosis by NCOA4-FTH1 axis by Chenyu Luo (12443535)

“…Whereas the extracellular matrix of tumors provides mechanical cues influencing tumor initiation and progression, its impact on ferroptosis and its mechanisms remains largely unexplored. In this study, we reveal that heightened mechanical tension sensitizes cells to ferroptosis, whereas decreased mechanics confers resistance. …”

Supplementary file 1_Multimodal monitoring of neutrophil activity during cardiac surgery.pdf by Darko Jovanovski (20872811)

“…Perioperatively, neutrophils maintained a stable response to platelet-activating factor (PAF) with regard to CD11b and CD66b expression but showed a decreased response in CD10. …”

Data Sheet 1_Multimodal monitoring of neutrophil activity during cardiac surgery.pdf by Darko Jovanovski (20872811)

“…Perioperatively, neutrophils maintained a stable response to platelet-activating factor (PAF) with regard to CD11b and CD66b expression but showed a decreased response in CD10. …”

Inactivation of Topo IV leads to a specific inability to replicate the terminus region of the chromosome. by Parisa D. Mokhtari (22209097)

“…<p>Replication profiles of growing wild-type, <i><i>gyrB</i></i>^ts, and <i><i>parE</i></i>^ts cells are plotted at 0, 1.5, and 3 hrs after temperature shift from 30°C to 43°C. …”