PANoptosis related genes. by Tianbao Feng (21722233)

“…Additionally, a protein-protein interaction (PPI) network was established to identify hub genes, and 8 machine learning algorithms were used to narrowed down hub genes. <i>BMX</i> and <i>CASP5</i> were consistently identified across all algorithms. …”

Table 3_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.csv by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Image 1_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.tif by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Table 5_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.csv by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Image 4_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.tif by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Table 2_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.xls by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Image 3_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.tif by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Table 1_Associations between metabolic-inflammatory biomarkers and Helicobacter pylori infection: an interpretable machine learning prediction approach.docx by Yue Zhang (30585)

“…In the external Chinese cohort, the TyG association attenuated (P = 0.057), but higher TyG/HDL-C quartiles remained significant. Among 11 algorithms, Random Forest (RF) and Gaussian Process (GP) achieved the highest AUCs on the training set (both 0.97) but dropped markedly on the validation set (both 0.75), indicating overfitting. …”

Table 6_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.csv by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Table 1_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.csv by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Image 5_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.tif by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Table 7_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.csv by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Table 4_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.csv by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Image 2_Athero-oncology perspective: identifying hub genes for atherosclerosis diagnosis using machine learning.tif by Liyan Zhao (340225)

“…UMAP plots from single-cell RNA sequencing data were used to analyze the expression patterns of hub genes, particularly focusing on macrophage-like SMCs in SMC lineage-traced mouse models. …”

Primer sequences of <i>Bm</i>x and β-actin. by Tianbao Feng (21722233)

“…Additionally, a protein-protein interaction (PPI) network was established to identify hub genes, and 8 machine learning algorithms were used to narrowed down hub genes. <i>BMX</i> and <i>CASP5</i> were consistently identified across all algorithms. …”

<b>dGenhancer v2</b>: A software tool for designing oligonucleotides that can trigger gene-specific Enhancement of Protein Translation. by Adam Master (20316450)

“…Prediction of total Gibbs energies (ΔG=ΔH–TΔS) of the 5’UTR structures can be performed using RNAstructure version 5.2. ΔGs are input data for final dGenhancer calculations as shown by Master A et al 2016¹</p><p dir="ltr"> The algorithms of the calculator were constructed to visualize ΔG changes after <i>in silico</i> introduced single nucleotide substitutions (SNPs) of the 5’UTR sequences. …”

Performance evaluation of SpaVGN on melanoma ST dataset. by Haiyan Wang (25821)

“…Color-coded regions correspond to different tissue domains. …”

Monotone Cubic B-Splines with a Neural-Network Generator by Lijun Wang (176511)

“…We evaluate our method against several existing methods, some of which do not use the monotonicity constraint, on some monotone curves with varying noise levels. We demonstrate that our method outperforms the other methods, especially in high-noise scenarios. …”

Massive Mixed Models in Julia by Phillip M. Alday (2814652)

“…<p dir="ltr">Traditional approaches to mixed effects models using generalized least squares or expectation-maximization approaches struggle to scale to datasets with many thousands of observations and hundreds of levels of a single blocking variable. Special casing of nesting or crossing of random effects is required to achieve acceptable computational performance, but this special casing often makes it very difficult to handle less-than-idealized cases, such partial crossing or multiple levels of nesting. …”