The data processing and analysis pipeline. حسب Xin Zhang (35492)

Diversity and specificity of lipid patterns in basal soil food web resources حسب Jakob Kühn (7288466)

"…In marine environments, multivariate optimization models (Quantitative Fatty Acid Signature Analysis) and Bayesian approaches (source-tracking algorithm) were established to predict the proportion of predator diets using lipids as tracers. …"

Natural language processing for automated quantification of bone metastases reported in free-text bone scintigraphy reports حسب Olivier Q. Groot (9370461)

"…The aim of this study was to develop a natural language processing (NLP) algorithm for binary classification (single metastasis versus two or more metastases) in bone scintigraphy reports of patients undergoing surgery for bone metastases.…"

Closed search (±5ppm) comparison against Crux and MSFragger using real-world data from PRIDE repository PXD000612 (top), PXD009861 (middle), and PXD001468 (bottom). حسب Muhammad Usman Tariq (11022141)

tUbenet Foundation Model Weights حسب Natalie Holroyd (7099391)

Optimal 8-mer and 9-mer SARS-CoV-2 epitope identification. حسب Mariah Hassert (5746874)

"…Peptide sequences are named based on the protein they are contained within, followed by the number of the first amino acid residue of the peptide in the context of the full protein, to the last amino acid residue. potential optimal 8-mer or 9-mer CD8+ T cell epitopes were predicted. …"

Cheminformatics-Guided Cell-Free Exploration of Peptide Natural Products حسب Jarrett M. Pelton (18143785)

"…The increasing ability to incorporate noncanonical amino acids and complement translation with recombinant enzymes has enabled cell-free production of peptide-based natural products (NPs) and NP-like molecules. …"

Data_Sheet_1_CLGBO: An Algorithm for Constructing Highly Robust Coding Sets for DNA Storage.docx حسب Yanfen Zheng (3814507)

"…In this study, we describe an enhanced gradient-based optimizer that includes the Cauchy and Levy mutation strategy (CLGBO) to construct DNA coding sets, which are used as primer and address libraries. …"

Table_1_bSRWPSO-FKNN: A boosted PSO with fuzzy K-nearest neighbor classifier for predicting atopic dermatitis disease.docx حسب Yupeng Li (507508)

"…However, diagnosing AD depends on clinicians’ subjective judgment, which may be missed or misdiagnosed sometimes.</p>Methods<p>This paper establishes a medical prediction model for the first time on the basis of the enhanced particle swarm optimization (SRWPSO) algorithm and the fuzzy K-nearest neighbor (FKNN), called bSRWPSO-FKNN, which is practiced on a dataset related to patients with AD. …"

Phylogenetic history of genes 5 and 11 in three related genomes. حسب Geleta Dugassa Barka (9099456)

Algoritmo de clasificación de expresiones de odio por tipos en español (Algorithm for classifying hate expressions by type in Spanish) حسب Daniel Pérez Palau (11097348)

"…</li></ul><p dir="ltr"><b>File Structure</b></p><p dir="ltr">The code generates and saves:</p><ul><li>Weights of the trained model (.h5)</li><li>Configured tokenizer</li><li>Training history in CSV</li><li>Requirements file</li></ul><p dir="ltr"><b>Important Notes</b></p><ul><li>The model excludes category 2 during training</li><li>Implements transfer learning from a pre-trained model for binary hate detection</li><li>Includes early stopping callbacks to prevent overfitting</li><li>Uses class weighting to handle category imbalances</li></ul><p dir="ltr">The process of creating this algorithm is explained in the technical report located at: Blanco-Valencia, X., De Gregorio-Vicente, O., Ruiz Iniesta, A., & Said-Hung, E. (2025). …"

Data_Sheet_1_Multiclass Classification Based on Combined Motor Imageries.pdf حسب Cecilia Lindig-León (7889777)

PathOlOgics_RBCs Python Scripts.zip حسب Ahmed Elsafty (16943883)

"…This process generated a ground-truth binary semantic segmentation mask and determined the bounding box coordinates (XYWH) for each cell. …"

Data_Sheet_1_The impact of family urban integration on migrant worker mental health in China.docx حسب Xiaotong Sun (6535064)

"…</p>Methods<p>This paper uses multi-dimensional indexes to measure family urban integration, covering economic, social and psychological dimensions, which may consider the complexity of integration. Utilizing a machine learning clustering algorithm, the research endeavors to assess the level of urban integration experienced by migrant workers and their respective families. …"

<b>AI for imaging plant stress in invasive species </b>(dataset from the article https://doi.org/10.1093/aob/mcaf043) حسب Erola Fenollosa (20977421)

"…The described extracted features were used to predict leaf betalain content (µg per FW) using multiple machine learning regression algorithms (Linear regression, Ridge regression, Gradient boosting, Decision tree, Random forest and Support vector machine) using the <i>Scikit-learn</i> 1.2.1 library in Python (v.3.10.1) (list of hyperparameters used is given in <a href="#sup1" target="_blank">Supplementary Data S5</a>). …"