Design and implementation of the Multiple Criteria Decision Making (MCDM) algorithm for predicting the severity of COVID-19. by Jiaqing Luo (10975030)

“…<p>(A). The MCDM algorithm-Stage 1. Preprocessing, this stage is the process of refining the collected raw data to eliminate noise, including correlation analysis and feature selection based on P values. …”

Addressing Imbalanced Classification Problems in Drug Discovery and Development Using Random Forest, Support Vector Machine, AutoGluon-Tabular, and H2O AutoML by Ayush Garg (21090944)

“…The important findings of our studies are as follows: (i) there is no effect of threshold optimization on ranking metrics such as AUC and AUPR, but AUC and AUPR get affected by class-weighting and SMOTTomek; (ii) for ML methods RF and SVM, significant percentage improvement up to 375, 33.33, and 450 over all the data sets can be achieved, respectively, for F1 score, MCC, and balanced accuracy, which are suitable for performance evaluation of imbalanced data sets; (iii) for AutoML libraries AutoGluon-Tabular and H2O AutoML, significant percentage improvement up to 383.33, 37.25, and 533.33 over all the data sets can be achieved, respectively, for F1 score, MCC, and balanced accuracy; (iv) the general pattern of percentage improvement in balanced accuracy is that the percentage improvement increases when the class ratio is systematically decreased from 0.5 to 0.1; in the case of F1 score and MCC, maximum improvement is achieved at the class ratio of 0.3; (v) for both ML and AutoML with balancing, it is observed that any individual class-balancing technique does not outperform all other methods on a significantly higher number of data sets based on F1 score; (vi) the three external balancing techniques combined outperformed the internal balancing methods of the ML and AutoML; (vii) AutoML tools perform as good as the ML models and in some cases perform even better for handling imbalanced classification when applied with imbalance handling techniques. …”

Parameter settings. by Yang Cao (53545)

“…<div><p>Differential Evolution (DE) is widely recognized as a highly effective evolutionary algorithm for global optimization. It has proven its efficacy in tackling diverse problems across various fields and real-world applications. …”

Fig 7 - by Muhammad Usman Tariq (11022141)

2D UMAP visualization of embedded spectra and peptide vectors generated by SpeCollate. by Muhammad Usman Tariq (11022141)

Using Variable Data-Independent Acquisition for Capillary Electrophoresis-Based Untargeted Metabolomics by Saki Kiuchi (19374255)

“…Capillary electrophoresis coupled with tandem mass spectrometry (CE-MS/MS) offers advantages in peak capacity and sensitivity for metabolic profiling owing to the electroosmotic flow-based separation. However, the utilization of data-independent MS/MS acquisition (DIA) is restricted due to the absence of an optimal procedure for analytical chemistry and its related informatics framework. …”

Using Variable Data-Independent Acquisition for Capillary Electrophoresis-Based Untargeted Metabolomics by Saki Kiuchi (19374255)

“…Capillary electrophoresis coupled with tandem mass spectrometry (CE-MS/MS) offers advantages in peak capacity and sensitivity for metabolic profiling owing to the electroosmotic flow-based separation. However, the utilization of data-independent MS/MS acquisition (DIA) is restricted due to the absence of an optimal procedure for analytical chemistry and its related informatics framework. …”

An exemplar procedure for activity flow modeling based on the direct and shortest paths at a network density of 15%. by Zhengdong Wang (35299)

datasheet1_Graph Neural Networks for Maximum Constraint Satisfaction.pdf by Jan Tönshoff (10192709)

Data_Sheet_1_Multiclass Classification Based on Combined Motor Imageries.pdf by Cecilia Lindig-León (7889777)

Performance of the SPP. by Virgile Andreani (17087764)

SHAP bar plot. by Meng Cao (105914)

“…The optimal model was further assessed for predictor importance utilizing the SHAP method and deployed on a web platform using the Streamlit library.…”

Sample screening flowchart. by Meng Cao (105914)

“…The optimal model was further assessed for predictor importance utilizing the SHAP method and deployed on a web platform using the Streamlit library.…”

Descriptive statistics for variables. by Meng Cao (105914)

“…The optimal model was further assessed for predictor importance utilizing the SHAP method and deployed on a web platform using the Streamlit library.…”

SHAP summary plot. by Meng Cao (105914)

“…The optimal model was further assessed for predictor importance utilizing the SHAP method and deployed on a web platform using the Streamlit library.…”

ROC curves for the test set of four models. by Meng Cao (105914)

“…The optimal model was further assessed for predictor importance utilizing the SHAP method and deployed on a web platform using the Streamlit library.…”

Display of the web prediction interface. by Meng Cao (105914)

“…The optimal model was further assessed for predictor importance utilizing the SHAP method and deployed on a web platform using the Streamlit library.…”

GSE96058 information. by Sepideh Zununi Vahed (9861298)

“…Subsequently, feature selection was conducted using ANOVA and binary Particle Swarm Optimization (PSO). During the analysis phase, the discriminative power of the selected features was evaluated using machine learning classification algorithms. …”

The performance of classifiers. by Sepideh Zununi Vahed (9861298)

“…Subsequently, feature selection was conducted using ANOVA and binary Particle Swarm Optimization (PSO). During the analysis phase, the discriminative power of the selected features was evaluated using machine learning classification algorithms. …”

Processed dataset to train and test the WGAN-GP_IMOA_DA_Ensemble model by Ramya Chinnasamy (21633527)