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proteins optimization » process optimization (Expand Search), routing optimization (Expand Search), property optimization (Expand Search)
common optimization » codon optimization (Expand Search), carbon optimization (Expand Search), cosmic optimization (Expand Search)
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binary b » binary _ (Expand Search)
b common » _ common (Expand Search), a common (Expand Search), _ commons (Expand Search)
proteins optimization » process optimization (Expand Search), routing optimization (Expand Search), property optimization (Expand Search)
common optimization » codon optimization (Expand Search), carbon optimization (Expand Search), cosmic optimization (Expand Search)
based proteins » based protein (Expand Search), based proteomics (Expand Search), capsid proteins (Expand Search)
library based » laboratory based (Expand Search)
binary b » binary _ (Expand Search)
b common » _ common (Expand Search), a common (Expand Search), _ commons (Expand Search)
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RosettaAMRLD: A Reaction-Driven Approach for Structure-Based Drug Design from Combinatorial Libraries with Monte Carlo Metropolis Algorithms
Published 2025“…By leveraging combinatorial ultralarge libraries, RosettaAMRLD ensures synthetic accessibility, optimizing protein–ligand interactions while efficiently sampling accessible chemical space. …”
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Optimal 8-mer and 9-mer SARS-CoV-2 epitope identification.
Published 2020“…Peptide sequences are named based on the protein they are contained within, followed by the number of the first amino acid residue of the peptide in the context of the full protein, to the last amino acid residue. potential optimal 8-mer or 9-mer CD8+ T cell epitopes were predicted. …”
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DataSheet1_Quantum-assisted fragment-based automated structure generator (QFASG) for small molecule design: an in vitro study.docx
Published 2024“…</p><p>Methods: We developed Quantum-assisted Fragment-based Automated Structure Generator (QFASG), a fully automated algorithm designed to construct ligands for a target protein using a library of molecular fragments. …”
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Distribution of Bound Conformations in Conformational Ensembles for X‑ray Ligands Predicted by the ANI-2X Machine Learning Potential
Published 2023“…This information is useful to guide the construction of libraries for shape-based virtual screening and to improve the docking algorithm to efficiently sample bound conformations.…”
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Distribution of Bound Conformations in Conformational Ensembles for X‑ray Ligands Predicted by the ANI-2X Machine Learning Potential
Published 2023“…This information is useful to guide the construction of libraries for shape-based virtual screening and to improve the docking algorithm to efficiently sample bound conformations.…”
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