Dual UHPLC-HRMS Metabolomics and Lipidomics and Automated Data Processing Workflow for Comprehensive High-Throughput Gut Phenotyping by P. Vangeenderhuysen (15854812)

“…To automate targeted processing, we optimized an R-based targeted peak extraction (TaPEx) algorithm relying on a database comprising retention time and mass-to-charge ratio (360 metabolites and 132 lipids), with batch-specific quality control curation. …”

A* Path-Finding Algorithm to Determine Cell Connections by Max Weng (22327159)

“…To address this, the research integrates a modified A* pathfinding algorithm with a U-Net convolutional neural network, a custom statistical binary classification method, and a personalized Min-Max connectivity threshold to automate the detection of astrocyte connectivity.…”

Runtime performance of SV callers. by De-Min Duan (20685513)

Flowchart scheme of the ML-based model. by Noshaba Qasmi (20405009)

“…<b>I)</b> Testing data consisting of 20% of the entire dataset. <b>J)</b> Optimization of hyperparameter tuning. <b>K)</b> Algorithm selection from all models. …”

Schematic representation of semi-automated algorithm for organoids analyzing. by Anna Demchenko (18449439)

Symmetry test result. by Jiyong Moon (16819302)

Algoritmo de clasificación de expresiones de odio por tipos en español (Algorithm for classifying hate expressions by type in Spanish) by Daniel Pérez Palau (11097348)

“…</p><h2>Model Architecture</h2><p dir="ltr">The model is based on <code>pysentimiento/robertuito-base-uncased</code> with the following modifications:</p><ul><li>A dense classification layer was added over the base model</li><li>Uses input IDs and attention masks as inputs</li><li>Generates a multi-class classification with 5 hate categories</li></ul><h2>Dataset</h2><p dir="ltr"><b>HATEMEDIA Dataset</b>: Custom hate speech dataset with categorization by type:</p><ul><li><b>Labels</b>: 5 hate type categories (0-4)</li><li><b>Preprocessing</b>:</li><li>Null values ​​removed from text and labels</li><li>Reindexing and relabeling (original labels are adjusted by subtracting 1)</li><li>Exclusion of category 2 during training</li><li>Conversion of category 5 to category 2</li></ul><h2>Training Process</h2><h3>Configuration</h3><ul><li><b>Batch size</b>: 128</li><li><b>Epoches</b>: 5</li><li><b>Learning rate</b>: 2e-5 with 10% warmup steps</li><li><b>Early stopping</b> with patience=2</li><li><b>Class weights</b>: Balanced to handle class imbalance</li></ul><h3>Custom Metrics</h3><ul><li>Recall for specific classes (focus on class 2)</li><li>Precision for specific classes (focus on class 3)</li><li>F1-score (weighted)</li><li>AUC-PR</li><li>Recall at precision=0.6 (class 3)</li><li>Precision at recall=0.6 (class 2)</li></ul><h2>Evaluation Metrics</h2><p dir="ltr">The model is evaluated using:</p><ul><li>Macro recall, precision, and F1-score</li><li>One-vs-Rest AUC</li><li>Accuracy</li><li>Per-class metrics</li><li>Confusion matrix</li><li>Full classification report</li></ul><h2>Technical Features</h2><h3>Data Preprocessing</h3><ul><li><b>Tokenization</b>: Maximum length of 128 tokens (truncation and padding)</li><li><b>Encoding of labels</b>: One-hot encoding for multi-class classification</li><li><b>Data split</b>: 80% training, 10% validation, 10% testing</li></ul><h3>Optimization</h3><ul><li><b>Optimizer</b>: Adam with linear warmup scheduling</li><li><b>Loss function</b>: Categorical Crossentropy (from_logits=True)</li><li><b>Imbalance handling</b>: Class weights computed automatically</li></ul><h2>Requirements</h2><p dir="ltr">The following Python packages are required:</p><ul><li>TensorFlow</li><li>Transformers</li><li>scikit-learn</li><li>pandas</li><li>datasets</li><li>matplotlib</li><li>seaborn</li><li>numpy</li></ul><h2>Usage</h2><ol><li><b>Data format</b>:</li></ol><ul><li>CSV file or Pandas DataFrame</li><li>Required column name: <code>text</code> (string type)</li><li>Required column name: Data type label (integer type, 0-4) - optional for evaluation</li></ul><ol><li><b>Text preprocessing</b>:</li></ol><ul><li>Automatic tokenization with a maximum length of 128 tokens</li><li>Long texts will be automatically truncated</li><li>Handling of special characters, URLs, and emojis included</li></ul><ol><li><b>Label encoding</b>:</li></ol><ul><li>The model classifies hate speech into 5 categories (0-4)</li><li><code>0</code>: Political hatred: Expressions directed against individuals or groups based on political orientation.…”

Flowchart of software workflow. by Gavrielle R. Untracht (11820311)

Methodology block diagram. by Gahao Chen (21688843)

“…Six machine learning algorithms - Random Forest (RF), AdaBoost, Light Gradient Boosting Machine (LightGBM), eXtreme Gradient Boosting (XGBoost), Categorical Boosting (CatBoost), and Tabular Prior-data Fitted Network version 2.0 (TabPFN-V2) - were implemented with five-fold cross-validation to optimize model hyperparameters. …”

Steps in the extraction of 14 coordinates from the CT slices for the curved MPR. by Linus Woitke (22783534)

“…Protruding paths are then eliminated using graph-based optimization algorithms, as demonstrated in f). …”

Data_Sheet_1_Alzheimer’s Disease Diagnosis and Biomarker Analysis Using Resting-State Functional MRI Functional Brain Network With Multi-Measures Features and Hippocampal Subfield... by Uttam Khatri (12689072)

“…Finally, we implemented and compared the different feature selection algorithms to integrate the structural features, brain networks, and voxel features to optimize the diagnostic identifications of AD using support vector machine (SVM) classifiers. …”

greenteg-core-axillary-1Hz by Stephen Karl Larroque (2809273)

“…This device is able to measure the core body temperature using dual heat flux method (DHFM) with an in-house AI algorithm that replaces the standard DHFM equation to obtain more reliable readings according to the manufacturer. …”

Figures and Tables by Divya C D (22799186)

“…Robots Comput. Vision XXXI: Algorithms and Techniques, Burlingame, CA, USA, Jan. 23–24, 2012.…”