Data inclusion and exclusion process. by Jingru Dong (14076094)

“…In this study, we develop a non-invasive breast cancer classification system for detecting cancer metastasis. We used Anaconda-Jupyter notebooks to develop various Python programming modules for text mining, data processing, and machine learning (ML) methods. …”

Modeling flowchart. by Jingru Dong (14076094)

“…In this study, we develop a non-invasive breast cancer classification system for detecting cancer metastasis. We used Anaconda-Jupyter notebooks to develop various Python programming modules for text mining, data processing, and machine learning (ML) methods. …”

S1 Data - by Jingru Dong (14076094)

“…In this study, we develop a non-invasive breast cancer classification system for detecting cancer metastasis. We used Anaconda-Jupyter notebooks to develop various Python programming modules for text mining, data processing, and machine learning (ML) methods. …”

<b>Analysis of Cost Leadership Strategy in Low-Cost Airline Enterprises with Deep Learning Method</b> by ZEHRA YARDI (20284389)

“…The tweets of Ryanair were processed using a program called Knime, which is one of the useful programs. …”

JASPEX model by Olugbenga OLUWAGBEMI (21403187)

“…The accompany data were processed and reformatted into its current form using Python programming within Jupyter Notebook enivironment and Shell programming.…”

Analysis of Sensing Modalities for Electrode-Induction Gas Atomization of Metal Powders: Vibrometer and Acoustic Emission Data (TDMS) by David Miller (20697878)

“…Both sensors were recorded with a PXI system and a custom LABVIEW program.</p><p dir="ltr">The files can be read either in Python with the <a href="https://nptdms.readthedocs.io/en/stable/" rel="noreferrer" target="_blank">nptdms </a>or just with Matlab.…”

Seamless integration of legacy robotic systems into a self-driving laboratory via NIMO: a case study on liquid handler automation by Ryo Tamura (1957942)

“…</p> <p>NIMO enables AI-driven automation in self-driving labs by bridging diverse experimental systems, including those using non-Python platforms, greatly enhancing SDL accessibility and flexibility.…”

Data and code for: A century of reforestation reduced anthropogenic warming in the eastern United States by Mallory Barnes (9756051)

“…</p><p>All the data can be processed using open-source programs such as R or Python. </p>…”

Data from: Dairy cows inoculated with highly pathogenic avian influenza virus H5N1 by AMY BAKER (17797757)

“…The pipeline uses Python v3.10, R v4.4 (R Development Core Team 2024), and SnakeMake to organize programs and script execution. …”

Datasets by Rishabh Das (20960957)

“…The Python program also randomly opens and closes the valve. …”

Archive of data and code associated with the publication "<b>Nanoscale 3D DNA tracing reveals the mechanism of self-organization of mitotic chromosomes</b>" by Beckwith, Brunner, e... by Kai Sandvold Beckwith (19646290)

“…</p><p dir="ltr">run_LE_sim.ipynb: Jupyter notebook containing code examples to run 1D loop extrusion simulations to be used as input for dynamic polymer simulations.</p><p dir="ltr">run_polychrom_LE.py: Executable python program to run dynamic polychrom simulations based on the 1D loop extrusions. …”

Code for AOP-DB v3 by Brandy Wilkinson (20827586)

Spectral inclusion and pollution for a class of dissipative perturbations - data by Alexei Stepanenko (19655629)

“…The datasets are numpy array (Python programming language) saved as pickle files and can be opened using the pickle package  (see https://docs.python.org/3/library/pickle.html).…”

CpG Signature Profiling and Heatmap Visualization of SARS-CoV Genomes: Tracing the Genomic Divergence From SARS-CoV (2003) to SARS-CoV-2 (2019) by Tahir Bhatti (20961974)

“…</p><p dir="ltr">Tools and Libraries</p><p dir="ltr">The following tools and libraries were used in this analysis:</p><p dir="ltr">Programming Language :</p><p dir="ltr">Python 3.13</p><p dir="ltr">Libraries :</p><p dir="ltr">pandas: For data manipulation and cleaning.…”

Fusion API (Supplementary Information 3) from GrowCAD: Bioinspired Mathematical Design for Additive Manufacturing by Nasim Mahmoodi (11535135)

“…This Python program generates a 3D body using nonguided loft function from cloud points data…”

Fusion API (Supplementary Information 2) from GrowCAD: Bioinspired Mathematical Design for Additive Manufacturing by Nasim Mahmoodi (11535135)

“…This Python program generates a 3D body using a guided rails loft function from cloud points data…”

The Improved Hydro-Sediment Numerical Model and Machine Learning Models by Yuning Tan (20580932)

“…The hydro-sediment model was implemented in the C# programming language using Visual Studio, while the machine learning models were developed in Python.…”

ML-UrineQuant by Warren Hill (20108487)

“…<p dir="ltr">ML-UrineQuant is a machine learning program written in Python for identifying and quantifying mouse urine on absorbent paper. …”

MPCID: A new high-resolution multi-precipitation concentration indicators dataset for mainland China by 栋洋 张 (20515496)

“…</li><li>Data Format<br>CSV files: The station - based annual data in CSV format can be easily opened and analyzed using spreadsheet software like Microsoft Excel or programming languages such as Python with libraries like Pandas.…”

software code of NeoDesign by Wenqian Yu (19730101)

“…Before running the program, it is necessary to check or download python packages and local functions as follow:</p><ul><li>gor4</li><li>mhcflurry</li><li>NetMHCpan4.1</li><li>NetChop3.1</li><li>pepsickle</li><li>hmmer(>3.4)</li></ul><h3>See the read.md file for instructions on how to use the code.…”