Reaction Alignment of the Tricarboxylic Acid (TCA) Cycle Network. حسب Adel Heydarabadipour (22290905)

Performance Benchmark: SBMLNetwork vs. SBMLDiagrams Auto-layout. حسب Adel Heydarabadipour (22290905)

"…<p>Log–log plot of median wall-clock time for SBMLNetwork’s C++-based auto-layout engine (blue circles, solid fit) and SBMLDiagrams’ implementation of the pure-Python NetworkX spring_layout algorithm (red squares, dashed fit), applied to synthetic SBML models containing 20–2,000 species, with a fixed 4:1 species-to-reaction ratio. …"

ALAAM models for the Deezer networks, with liking “alternative” music as the outcome variable. حسب Alex Stivala (8356257)

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Apple point cloud generated by python script. حسب Xiaoyang Liu (1815211)

Models estimated using ALAAMEE for the Deezer networks, with liking jazz as the outcome variable. حسب Alex Stivala (8356257)

الموضوعات:

Overview of the SBML models used in this study. The collection of models was retrieved from Biomodels [43] and a previously reported collection of SBML benchmark models [11]. The n... حسب Paul van Lent (16876977)

الموضوعات:

Exploring the integration of metaverse technologies in engineering education through the SAMR model حسب Snezhana Dineva (22444471)

"…The final deliverable is a plan for phased integration of metaverse learning into a Python programming course following this model, building on existing best practices.…"

Jaxkineticmodel allows for hybridizing kinetic models with neural networks. حسب Paul van Lent (16876977)

الموضوعات:

Analysis of convergence properties for a collection of SBML models. حسب Paul van Lent (16876977)

الموضوعات:

2D Orthogonal Planes Split: <b>Python</b> and <b>MATLAB</b> code | <b>Source Images</b> for Figures حسب Nektarios Valous (20715650)

"…The output files generated by the code include results from both Python and MATLAB implementations; these output images are provided as validation, demonstrating that both implementations produce matching results.…"

EFGs: A Complete and Accurate Implementation of Ertl’s Functional Group Detection Algorithm in RDKit حسب Gonzalo Colmenarejo (650249)

"…In this paper, a new RDKit/Python implementation of the algorithm is described, that is both accurate and complete. …"

Python file of the computational framework. حسب Benoit Haut (9753029)

Workflow of a typical Epydemix run. حسب Nicolò Gozzi (8837522)

"…<div><p>We present Epydemix, an open-source Python package for the development and calibration of stochastic compartmental epidemic models. …"

Fitting a feast/famine cycle to a glycolysis model. حسب Paul van Lent (16876977)

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The format of the electrode csv file حسب Joseph James Tharayil (21416715)

"…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …"

The format of the simulation reports حسب Joseph James Tharayil (21416715)

"…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …"

Comparison of BlueRecording with existing tools حسب Joseph James Tharayil (21416715)

"…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …"

The format of the weights file حسب Joseph James Tharayil (21416715)

"…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …"

Cost functions implemented in Neuroptimus. حسب Máté Mohácsi (20469514)

"…To address these issues, we developed a generic platform (called Neuroptimus) that allows users to set up neural parameter optimization tasks via a graphical interface, and to solve these tasks using a wide selection of state-of-the-art parameter search methods implemented by five different Python packages. Neuroptimus also offers several features to support more advanced usage, including the ability to run most algorithms in parallel, which allows it to take advantage of high-performance computing architectures. …"

Multifunctional Lead-Free Halide Perovskite-Based Nanogenerator for Enhanced Energy Harvesting and Information-Encrypted Transmission حسب Monika Salesh (15306281)

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