Sample data for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 3 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Sample data for <i>Telmatochromis temporalis</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 4 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 1 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 2 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 5 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 6 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Executable Books in Robotics by Murilo Marinho (21508857)

“…In this work, to showcase the results of the Open Research Fellowship 24-25 in the field of Robotics, I show one way to help bridge the theory-practice gap creating a fully open CC BY-NC-SA 4.0 licensed executable textbook in Python, based on Jupyter notebooks. …”

Fast, FAIR, and Scalable: Managing Big Data in HPC with Zarr by Alfonso Ladino (21447002)

<b>Code: Inferred movements of SARS-CoV-2 infections between the 25 administrative regions of Peru (Figure 3) + </b><b>International spread of four SARS-CoV-2 sub-lineages of Peruv... by Pablo Tsukayama (22614461)

Supplementary file 1_ParaDeep: sequence-based deep learning for residue-level paratope prediction using chain-aware BiLSTM-CNN models.docx by Piyachat Udomwong (22563212)

“…Its efficiency and scalability make it well-suited for early-stage antibody discovery, repertoire profiling, and therapeutic design, particularly in the absence of structural data. The implementation is freely available at https://github.com/PiyachatU/ParaDeep, with Python (PyTorch) code and a Google Colab interface for ease of use.…”

Global Aridity Index and Potential Evapotranspiration (ET0) Database: Version 3.1 by Robert Zomer (12796235)

“…</p><p dir="ltr">The Python programming source code used to run the calculation of ET0 and AI is provided and available online on Figshare at:</p><p dir="ltr">https://figshare.com/articles/software/Global_Aridity_Index_and_Potential_Evapotranspiration_Climate_Database_v3_-_Algorithm_Code_Python_/20005589</p><p dir="ltr">Peer-Review Reference and Proper Citation:</p><p dir="ltr">Zomer, R.J.; Xu, J.; Trabuco, A. 2022. …”

Overview of generalized weighted averages. by Nobuhito Manome (8882084)

“…GWA-UCB1 outperformed G-UCB1, UCB1-Tuned, and Thompson sampling in most problem settings and can be useful in many situations. The code is available at <a href="https://github.com/manome/python-mab" target="_blank">https://github.com/manome/python-mab</a>.…”

HCC Evaluation Dataset and Results by Jens-Rene Giesen (18461928)

“…The only requirement for running this script is a Python 3.6+ interpreter as well as an installation of the <code>numpy</code> package. …”

MCCN Case Study 3 - Select optimal survey locality by Donald Hobern (21435904)

“…</p><p dir="ltr">This is a simple implementation that uses four environmental attributes imported for all Australia (or a subset like NSW) at a moderate grid scale:</p><ol><li>Digital soil maps for key soil properties over New South Wales, version 2.0 - SEED - see <a href="https://esoil.io/TERNLandscapes/Public/Pages/SLGA/ProductDetails-SoilAttributes.html" target="_blank">https://esoil.io/TERNLandscapes/Public/Pages/SLGA/ProductDetails-SoilAttributes.html</a></li><li>ANUCLIM Annual Mean Rainfall raster layer - SEED - see <a href="https://datasets.seed.nsw.gov.au/dataset/anuclim-annual-mean-rainfall-raster-layer" target="_blank">https://datasets.seed.nsw.gov.au/dataset/anuclim-annual-mean-rainfall-raster-layer</a></li><li>ANUCLIM Annual Mean Temperature raster layer - SEED - see <a href="https://datasets.seed.nsw.gov.au/dataset/anuclim-annual-mean-temperature-raster-layer" target="_blank">https://datasets.seed.nsw.gov.au/dataset/anuclim-annual-mean-temperature-raster-layer</a></li></ol><h4><b>Dependencies</b></h4><ul><li>This notebook requires Python 3.10 or higher</li><li>Install relevant Python libraries with: <b>pip install mccn-engine rocrate</b></li><li>Installing mccn-engine will install other dependencies</li></ul><h4><b>Overview</b></h4><ol><li>Generate STAC metadata for layers from predefined configuratiion</li><li>Load data cube and exclude nodata values</li><li>Scale all variables to a 0.0-1.0 range</li><li>Select four layers for comparison (soil organic carbon 0-30 cm, soil pH 0-30 cm, mean annual rainfall, mean annual temperature)</li><li>Select 10 random points within NSW</li><li>Generate 10 new layers representing standardised environmental distance between one of the selected points and all other points in NSW</li><li>For every point in NSW, find the lowest environmental distance to any of the selected points</li><li>Select the point in NSW that has the highest value for the lowest environmental distance to any selected point - this is the most different point</li><li>Clean up and save results to RO-Crate</li></ol><p><br></p>…”

Artifact for the IJCAI 2024 paper "Solving Long-run Average Reward Robust MDPs via Stochastic Games" by Krishnendu Chatterjee (15367413)

“…<br></pre></pre><h2>Structure and How to run</h2><p dir="ltr">There are four Python files in the repository.</p><pre><pre>(i) `StrategyIteration.py` is the backend code, containing the implementation of the RPPI algorithm described in the paper.…”

<b>Anthropogenic nutrient inputs cause excessive algal growth for nearly half the world’s population</b> by Richard McDowell (7311011)

“…<p dir="ltr">Contains</p><p dir="ltr">Final Analysis Output.xlsx: Current and reference concentrations of DRP, TP, NO3-N and TN along with pivot table analysis</p><p dir="ltr">Code: Python code used to implement the model in ArcGIS Pro.…”

Genomic Surveillance of Pemivibart (VYD2311) Escape-Associated Mutations in SARS-CoV-2: December 2025 BioSamples (n=2) by Tahir Bhatti (20961974)

“…Full source code and version details are available upon request.…”

A Hybrid Ensemble-Based Parallel Learning Framework for Multi-Omics Data Integration and Cancer Subtype Classification by Mohammed Nasser Al-Andoli (21431681)

“…<p dir="ltr">The code supports replication of results on TCGA Pan-cancer and BRCA datasets and includes data preprocessing, model training, and evaluation scripts:<br>Python scripts for data preprocessing and integration</p><ul><li>Autoencoder implementation for multimodal feature learning</li><li>Hybrid ensemble training code (DL/ML models and meta-learner)</li><li>PSO and backpropagation hybrid optimization code</li><li>Parallel execution scripts</li><li>Instructions for replicating results on TCGA Pan-cancer and BRCA datasets</li></ul><p></p>…”