Five Operator Lattice Simulation by James McDaniel (22522571)

“…<p dir="ltr">This dataset contains the Python simulation code and supporting documentation for the paper <i>A Five-Operator Lattice of Consciousness: A Logical Framework for Mediation Between Implicit and Explicit Processing</i> (McDaniel, 2025).…”

RealBench: A Repo-Level Code Generation Benchmark Aligned with Real-World Software Development Practices by RealBench RealBench (22275393)

“…<br>│ ├── model_gen/ # Code generation using various LLMs.<br>│ │ ├── generate/ # LLM inference implementations.…”

DeepB3Pred - code by Saleh Musleh (22263718)

A game of life with dormancy - Code by Daniel Henrik Nevermann (20376933)

“…</p><ul><li>To run an animated simulation, use `python simulation.py'.</li><li>The implementation of Spore Life can be found in gol.py.…”

Simple implementation examples of agent AI on free energy calculation and phase-field simulation by Toshiyuki Koyama (22828581)

“…</p> <p>Using Gibbs energy calculations and diffusion simulations as examples, we demonstrated the implementation method and usefulness of simple agent AI, where sample python codes are distributed as supplemental materials.…”

DeepB3Pred_source_code by Muhammad Arif (17012472)

Testing Code for JcvPCA and JsvCRP. by Océane Dubois (21989812)

“…<p>This file contains the code that implements both metrics in python and apply them on a simulated dataset.…”

Data and code for: Automatic fish scale analysis by Christian Vogelmann (21646472)

“…</p><h3>Includeed in this repository:</h3><ul><li><b>Raw data files:</b></li><li><code>comparison_all_scales.csv</code> – comparison_all_scales.csv - manually verified vs. automated measurements of 1095 coregonid scales</li></ul><ul><li><ul><li><code>Validation_data.csv</code> – manually measured scale data under binocular</li><li><code>Parameter_correction_numeric.csv</code> – calibration data (scale radius vs. fish length/weight)</li></ul></li><li><b>Statistical results:</b></li><li><ul><li><code>comparison_stats_core_variables.csv</code> – verification statistics (bias, relative error, limits of agreement)</li><li><code>Validation_statistics.csv</code> – summary statistics and model fits (manual vs. automated)</li></ul></li><li><b>Executable script (not GUI):</b></li><li><ul><li><code>Algorithm.py</code> – core processing module for scale feature extraction<br>→ <i>Note: The complete Coregon Analyzer application (incl. …”

Efficient, Hierarchical, and Object-Oriented Electronic Structure Interfaces for Direct Nonadiabatic Dynamics Simulations by Sascha Mausenberger (22225772)

“…We present a novel, flexible framework for electronic structure interfaces designed for nonadiabatic dynamics simulations, implemented in Python 3 using concepts of object-oriented programming. …”

PTPC-UHT bounce by David Parry (22169299)

“…<br>It contains the full Python implementation of the PTPC bounce model (<code>PTPC_UHT_bounce.py</code>) and representative outputs used to generate the figures in the paper. …”

<b>Code: Inferred movements of SARS-CoV-2 infections between the 25 administrative regions of Peru (Figure 3) + </b><b>International spread of four SARS-CoV-2 sub-lineages of Peruv... by Pablo Tsukayama (22614461)

“…The visualizations were generated using the Cartopy, GeoPandas, Matplotlib, Basemap, and Shapely libraries.</p><p dir="ltr"><b>Figure 3. </b><b>Inferred movements of SARS-CoV-2 infections between the 25 administrative regions of Peru. …”

Code and data for reproducing the results in the original paper of DML-Geo by Pengfei CHEN (8059976)

“…<p dir="ltr">This asset provides all the code and data for reproducing the results (figures and statistics) in the original paper of DML-Geo</p><h2>Main Files:</h2><p dir="ltr"><b>main.ipynb</b>: the main notebook to generate all the figures and data presented in the paper</p><p dir="ltr"><b>data_generator.py</b>: used for generating synthetic datasets to validate the performance of different models</p><p dir="ltr"><b>dml_models.py</b>: Contains implementations of different Double Machine Learning variants used in this study.…”

Data sets and coding scripts for research on sensory processing in ADHD and ASD by Vesko Varbanov (9687029)

“…The repository includes raw and matched datasets, analysis outputs, and the full Python code used for the matching pipeline.</p><h4>Ethics and Approval</h4><p dir="ltr">All procedures were approved by the University of Sheffield Department of Psychology Ethics Committee (Ref: 046476). …”

RMSF results of the ligands within the receptor during the simulation. by Kassim Folorunsho Adebambo (22806479)

Output datasets from ML–assisted bibliometric workflow in African phytochemical metabolomics research by Temitope Omogbene (18615415)

“…<p dir="ltr">This collection contains supplementary datasets generated during the machine learning–assisted bibliometric workflow for metabolomics and phytochemical research. The datasets represent sequential outputs derived from the integration and harmonisation of bibliographic metadata from <b>Scopus</b>, <b>Web of Science (WoS)</b>, and <b>Dimensions</b>, processed via R and Python environments.…”

LBQANA python code + Merged Gene Expression Dataset from GSE10810, GSE17907, GSE20711, GSE42568, GSE45827, and GSE61304 for Breast Cancer Biomarker Discovery by M RN (9866504)

Comparison of tools with features similar to <i>bmdrc,</i> and a descriptions of the modules within the <i>bmdrc</i> package.  by David J. Degnan (13886280)

“…<p>(A) Highlighted tool features from a selection of benchmark dose modeling tools to contextualize the needs bmdrc and other existing tools fill. (B) Workflow of the <i><i>bmdrc</i></i> Python library. …”

Cross-validation of Lasso regression of enhanced CT images. by Jiangfa Li (18345033)

Cross-validation of Lasso regression of enhanced MRI images. by Jiangfa Li (18345033)

The cross-validation diagram of Lasso regression of enhanced CT combined with MRI images. by Jiangfa Li (18345033)