Hippocampal and cortical activity reflect early hyperexcitability in an Alzheimer's mouse model by Marina Diachenko (19739092)

“…</p><p dir="ltr">All data are available upon request. The standalone Python implementation of the fE/I algorithm is available under a CC-BY-NC-SA license at <a href="https://github.com/arthur-ervin/crosci" target="_blank">https://github.com/arthur-ervin/crosci</a>. …”

Multisession fNIRS-EEG data of Post-Stroke Motor Recovery: Recordings During Intact and Paretic Hand Movements by Aleksandra Medvedeva (21221383)

“…</p><p dir="ltr">1)The subject identifier</p><p dir="ltr">2)The side of the paretic limb (R for right, L for left)</p><p dir="ltr">3)The session number (with session 1 representing the first day of rehabilitation and session 6 corresponding to the period immediately preceding patient withdrawal)</p><p dir="ltr">4)The target hand involved in the motor task.…”

CpG Signature Profiling and Heatmap Visualization of SARS-CoV Genomes: Tracing the Genomic Divergence From SARS-CoV (2003) to SARS-CoV-2 (2019) by Tahir Bhatti (20961974)

“…</p><p dir="ltr">Tools and Libraries</p><p dir="ltr">The following tools and libraries were used in this analysis:</p><p dir="ltr">Programming Language :</p><p dir="ltr">Python 3.13</p><p dir="ltr">Libraries :</p><p dir="ltr">pandas: For data manipulation and cleaning.…”

<b>Dataset for manuscript: </b><b>Phylogenetic and genomic insights into the evolution of terpenoid biosynthesis genes in diverse plant lineages</b> by Puguang Zhao (19023065)

“…After extracting the gene IDs, make sure to add a column header named "ID" in the output file (DXR.xlsx).</p><p dir="ltr"> Python Scripts (.py): These three scripts are executed in Visual Studio Code, using Python 3.10.4 as the runtime environment.…”

Bacterial persistence modulates the speed, magnitude and onset of antibiotic resistance evolution by Giorgio Boccarella (22810952)

“…<br><br><br>## System Requirements<br><br>### Python Environment<br>- Python 3.7+<br>- Required packages: <i>`numpy`</i>, <i>`pandas`</i>, <i>`matplotlib`</i>, <i>`seaborn`</i>, <i>`scipy`</i>, <i>`mpi4py`</i><br>- Optional: <i>`goatools`</i> (for gene ontology analysis in Fig_4_c)<br><br>### R Environment <br>- R 4.0+<br>- Required packages: <i>`dplyr`</i>, <i>`tidyr`</i>, <i>`ggplot2`</i>, <i>`readxl`</i>, <i>`cowplot`</i><br><br>## Citation<br><br>If you use these scripts in your research, please cite the original manuscript:<br><br>[Citation information will be added upon publication]<br><br><br></p>…”

Endogenous giant viruses in polar microalgae by Mohammad Moniruzzaman (20325651)

Warm-Rain Precipitation by Xiaojun Guan (22098905)

“…<p dir="ltr">(1) The RAR file named “vertical_profiles_of_polarimetric_variables” contains 9 .npy files generated using Python’s NumPy library. These files are described as follows:</p><p dir="ltr">“warm_rain_vertical_profile_of_XX.npy”, where XX represents ZH, ZDR, or KDP. …”

Ambient Air Pollutant Dynamics (2010–2025) and the Exceptional Winter 2016–17 Pollution Episode: Implications for a Uranium/Arsenic Exposure Event by Thomas Clemens Carmine (19756929)

“…Includes imputation statistics, data dictionary, and the Python imputation code (Imputation_Air_Pollutants_NABEL.py). …”

Cognitive Fatigue by Rui Varandas (11900993)

“…Written informed consent was obtained before participating and all Ethical Procedures approved by the Ethics Committee of NOVA University of Lisbon were thoroughly followed.In this study, we omitted the data from one participant due to the insufficient duration of data acquisition.</p><p dir="ltr">2.3. Data labelling</p><p dir="ltr">The labels <i>easy</i>, <i>difficult</i>, <i>very difficult</i> and<i> repeat</i> found in the ECG_lesson_answers.txt files represent the subjects' opinion of the content read in the ECG lesson. …”

Tracking when the number of individuals in the video frame changes. by Hirotsugu Azechi (20700528)

“…To verify tracking of other mice with leftover keypoints due to the absence of some mice, distances (d: pixels) between identical keypoints for 3 IDs were calculated for each keypoint. The stray keypoints indicated above the outlined mouse, which represents absence in the frame in the top schematic, were evaluated to determine whether they could predict another mouse in the arena, following the annotation method described in (B). …”

<b>Data and Code from 'The Perfect and Legitimate Bribe': A Transparent Record of Human-AI Collaboration in Legal Scholarship</b> by Joshua Stern (21748181)

“…</p><p dir="ltr">For optimal viewing of `collated-anonymized.txt`, a text editor that can handle long lines without word wrapping is recommended to preserve the indentation that represents the conversational branching structure.</p><p><br></p><p dir="ltr">### **Running Code/Software**</p><p dir="ltr">The provided scripts (`collator-ipynb.txt` and `sentence-ancestry-ipynb.txt`) are Jupyter Notebooks and require a Python 3 environment to run. …”

LGF v7HELLAS: A Dynamical Model of Ethical Convergence and Lambda-Zero Transition by heojeongbeom heo (22544705)

“…<h2><b>Description</b></h2><p dir="ltr"><b>LGF v7.Hellas</b> represents the final, validated form of the <i>Language Gravitational Field (LGF)</i> model, completing the transition from early unstable versions (v5.2) to the fully stable, reproducible, scientifically grounded system (v5.3 → v7.0 → v7.Hellas).…”

End-to-end example-based sim-to-real RL policy transfer based on neural stylisation with application to robotic cutting by Jamie Hathaway (10285367)

“…Columns obs_0 through obs_12 were used for VAE training</p><p dir="ltr">NOTE: The reward columns in the real folders do not contain meaningful data!</p><h3>policy/</h3><p dir="ltr">This folder contains pickled trajectories, in the form of a Python list.…”

Audio Datasets of belt conveyor rollers in mines by Juan Liu (19687435)

“…<p dir="ltr">The dataset for this project comprises audio recordings of the operational states of belt conveyor rollers in a mining environment, covering three conditions: normal roller operation, roller shell cracking, and roller breakage. …”

Methodological Approach Based on Structural Parameters, Vibrational Frequencies, and MMFF94 Bond Charge Increments for Platinum-Based Compounds by Gloria Castañeda-Valencia (20758502)

“…The developed bci optimization tool, based on MMFF94, was implemented using a Python code made available at https://github.com/molmodcs/bci_solver. …”

Shadowed Realities: An Investigation of UI Attacks in WebXR - Research Artifacts by Chandrika Mukherjee (20576567)

“…These are implemented using Python. The entry point to the scripts is main_analysis.py. …”

Data and Code repository for the paper: <b>Visual loom caused by self- or object-movement elicits distinct responses in mouse superior colliculus</b> by Stefano Zucca (21686006)

“…Each single .mat file represents a single recording session: the animal ID is specified as “MYYXXX” where YY represents the year of the recording (i.e. …”

Daily histograms of wind speed (100m), wind direction (100m) and atmospheric stability derived from ERA5 by Marc Imberger (6226619)

“…The following bins (left edges) have been used to create the histograms:</p><p dir="ltr">Wind speed: [0, 40) m/s (bin width 1 m/s)<br>Wind direction: [0,360) deg (bin width 15 deg)<br>Stability: 5 discrete stability classes (1: very unstable, 2: unstable, 3: neutral, 4: stable, 5: very stable)</p><p><br></p><p dir="ltr"><b>Main Purpose:</b> The dataset serves as minimum input data for the CLIMatological REPresentative PERiods (climrepper) python package (https://gitlab.windenergy.dtu.dk/climrepper/climrepper) in preparation for public release).…”

Sonification of Growing Black Hole by Rose Shepherd (20328444)

“…We used the open source Python package STRAUSS to produce the sonification (Trayford and Harrison 2023). …”

Sonification of Warming Stripes by Christopher Harrison (9448751)

“…The sonification was produced using the STRAUSS sonification Python package.</p><p dir="ltr">Here we release:<br>1. …”