Comparison of BlueRecording with existing tools by Joseph James Tharayil (21416715)

“…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …”

code implementing the finite element method and finite difference method from Hybrid PDE-ODE Models for Efficient Simulation of Infection Spread in Epidemiology by Kristina Maier (20520371)

“…This dataset contains code implementing the finite element method based on Kaskade 7 (C++) and code implementing the finite difference method (Python) for the development of hybrid PDE-ODE models aimed at efficiently simulating infection spread in epidemiology. …”

SecurityGuidelinesRetrievalForPythonCodeGen by Catherine Tony (18368913)

“…Using Task-Specific Guidelines for Secure Python Code Generation: Replication Package"</p><p dir="ltr">This replication package contains SecGuide along with the results of each step followed in its creation, the scripts that implement all the prompting approaches and the code generated by the LLMs using these approaches. …”

Reproducible implementation for article: Reproducibility study of the modular and reusable model of epithelial transport in the proximal convoluted tubule by Leyla Noroozbabaee (14301173)

Five Operator Lattice Simulation by James McDaniel (22522571)

“…<p dir="ltr">This dataset contains the Python simulation code and supporting documentation for the paper <i>A Five-Operator Lattice of Consciousness: A Logical Framework for Mediation Between Implicit and Explicit Processing</i> (McDaniel, 2025).…”

Python implementation for image-based ERT inversion using ViT, CNN, UNet, and LDM models, and related data conversion and visualization by Huichao Yin (14589020)

“…<p dir="ltr">Python implementation for image-based ERT inversion using ViT, CNN, UNet, and LDM models, and related data conversion and visualization.…”

Supporting data for "Interpreting complex ecological patterns and processes across differentscales using Artificial Intelligence" by Yifei Gu (9507104)

“…The detailed implementation, source code and demo dataset are included in dedicated folders for each chapter.…”

PYTHON by Kan Jia (21666161)

Left schematic of the XOR gate implementation [11]. by Fabricio Cravo (21387854)

Example change statistic implementations. by Alex Stivala (8356257)

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Dialogue Propositional Content Replacement (DPCR) code by Jacopo Amidei (10511297)

“…<p dir="ltr">This resource consists of a Python notebook with code that was implemented for a research project that developed a novel method for testing the components of theories of (dialogue) coherence through utterance substitution. …”

Online Resource 3: Word Cloud Dataset and Code by Jessica Zylla (17692920)

“…<p dir="ltr">Online Resource 3: Word Cloud Dataset and Code. This set of files are part of Online Resource 3, which allows readers to implement a Jupyter Notebook Python program to create a word cloud based on survey responses. …”

CSMILES: A Compact, Human-Readable SMILES Extension for Conformations by James W. Furness (22319738)

“…A two-way conversion from three-dimensional (3D) structure to CSMILES has been implemented, and the article is accompanied by a Python code which effectuates such conversions. …”

CSMILES: A Compact, Human-Readable SMILES Extension for Conformations by James W. Furness (22319738)

“…A two-way conversion from three-dimensional (3D) structure to CSMILES has been implemented, and the article is accompanied by a Python code which effectuates such conversions. …”

Python script for binary classification with RoBERTa by Maija Ozola-Schade (20938460)

Python sript. by Kan Jia (6438599)

Workflow of segmentation model creation and application. by Vincent Hickl (16947429)

Overview of the SBML models used in this study. The collection of models was retrieved from Biomodels [43] and a previously reported collection of SBML benchmark models [11]. The n... by Paul van Lent (16876977)

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Jaxkineticmodel allows for hybridizing kinetic models with neural networks. by Paul van Lent (16876977)

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Analysis of convergence properties for a collection of SBML models. by Paul van Lent (16876977)

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