<i>In vivo</i> identification of <i>Toxoplasma gondii</i> antigenic proteins and <i>in silico</i> study of their polymorphism. حسب Julie DENIS (19696753)

"…The filtered data is presented in the <b>Filtered_Variants</b> document.…"

<b>InterHub: A Naturalistic Trajectory Dataset with Dense Interaction for Autonomous Driving</b> حسب Xiyan Jiang (20320758)

"…The tools for navigating InterHub involve the following three parts:</p><ol><li>0_data_unify.py converts various data resources into a unified format for seamless interaction event extraction.…"

Data files accompanying our PLoS One publication حسب Peter Hinow (21810605)

"…The videos were digitized and the positional data were saved in .xlsx or .csv format, respectively. The python codes contain the numerical implementations of our mathematical models.…"

Knowledge Graph validation using SHACL Shapes حسب Ángel Iglesias Préstamo (19745767)

"…Leveraging Rust’s performance and safety features, rudof provides efficient validation tools and Python bindings for integration with data science workflows. …"

Comprehensive Fluid and Gravitational Dynamics Script for General Symbolic Navier-Stokes Calculations and Validation حسب Stylianos Touloumidis (19938747)

Online Test-time Adaptation for Interatomic Potentials حسب Cui Taoyong (18076012)

"…LAMMPS - A flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales. …"

A Quick Guide to Prompt Engineering: Using Generative AI Wisely in Learning and Work حسب Uce Indahyanti (21324434)

Validation data for paper "SSSort 2.0: A semi-automated spike detection and sorting system for single sensillum recordings" حسب Lydia Ellison (9272843)

"…</p><p dir="ltr"><b>Abstract</b></p><p dir="ltr">Single-sensillum recordings are a valuable tool for sensory research which, by their nature, access extra-cellular signals typically reflecting the combined activity of several co-housed sensory neurons. …"

<b>EEG dataset for multi-class Chinese character stroke and pinyin vowel handwriting imagery (16 subjects, CCS-HI & SV-HI)</b> حسب Fan Wang (22125886)

"…</p><p><br></p><p dir="ltr">For data loading/analysis, use EEGLAB (MATLAB) or MNE-Python 1.7.0 (Python); for decoding, use scikit-learn 1.6.1 or PyTorch 2.0.0+cu117 (all verified versions). …"

Datasets and Trajectories for Online Test-time Adaptation for Better Generalization of Interatomic Potentials to Out-of-distribution Data حسب Cui Taoyong (18076012)

"…</i> LAMMPS - A flexible simulation tool for particle-based materials modeling at the atomic, meso, and continuum scales. …"

Streamlining a National Flood Assessment using a Flow Scheduler حسب eRNZ Admin (6438486)

<b>Myelin oligodendrocyte glycoprotein (MOG) Degradome Foundation Atlas</b> حسب Axel Petzold (7076261)

"…</li></ul><h3>Reproducibility and Code Availability</h3><p dir="ltr">Dataset generation is fully reproducible using open-source tools:</p><ul><li>Python</li><li>SAS</li></ul><p dir="ltr">All required scripts are included in the repository and are well documented to support local replication and custom adaptations. …"

Elements: Streaming Molecular Dynamics Simulation Trajectories for Direct Analysis – Applications to Sub-Picosecond Dynamics in Microsecond Simulations حسب Matthias Heyden (17087794)

"…We have implemented this streaming interface in the MD engines NAMD, LAMMPS, and GROMACS</p><p dir="ltr">On the client side, we developed the IMDClient Python package which receives the streamed data, stores into a custom buffer, and provides it to external tools as NumPy arrays, facilitating integration with scientific computing workflows. …"

FORCE11: FROGS: Facilitating Reproducible Open (Geo)Science حسب Deborah Khider (4673140)

Voxel Dataset حسب David Towers (12857447)

"…<p>The Voxel dataset is a constructed dataset of 3D shapes designed to present a unique problem for ML and NAS tools. Instead of a photo of a 3D object, we exploit ML's ability to work across N number of 'colour' channels and use this dimension as a third dimension for images.…"

MSc Personalised Medicine at Ulster University حسب Steven Watterson (100045)

"…</b> Introducing computational approaches to studying genes, proteins or metabolites, this module teaches Python coding, data analysis and how to work with the databases that support data analysis.…"

Wolframin Degradome Foundation Atlas حسب Axel Petzold (7076261)

"…To extract, use the following command in a bash terminal:</p><pre><pre>tar -xvJf Wolframin_Degradome_Foundation_Atlas_v3.tar.gz<br></pre></pre><p dir="ltr"><b>Codes</b><br>Dataset generation is fully reproducible using three open-source tools: <b>Python, BLAST, and SAS</b>. Accompanying scripts are included in the repository and are fully documented for transparency. …"

Globus Compute: Federated FaaS for Integrated Research Solutions حسب eRNZ Admin (6438486)

"…In particular, he works on tools to streamline data analysis pipelines and develops integrated research solutions that incorporate HPC resources into scientific processes. …"

<b>MSLU-100K: A multi-source land use dataset of Chinese major cities</b> حسب Yao Yao (7903457)

"…"Other" folder</h3><ul><li>"Tools" folder—The "Tools" folder contains the toolkits required for model training.…"

<b>GFAP Degradome Foundation Atlas</b> حسب Axel Petzold (7076261)

"…To extract you can use the bash terminal command: <br><b><i>tar -xvJf GFAP_Degradome_Foundation_Atlas_v3.tar.gz</i></b></p><p dir="ltr"><br></p><h3>Codes</h3><p dir="ltr">Dataset generation is reproducible using three open-source tools:<br><b>Python</b>, <b>BLAST</b>, and <b>SAS</b>.…"