<b>Dataset for manuscript: </b><b>Phylogenetic and genomic insights into the evolution of terpenoid biosynthesis genes in diverse plant lineages</b> by Puguang Zhao (19023065)

“…It is run directly in the command: python3 cdhit.py </p><p dir="ltr"> This script is designed to remove redundant sequences using the CD-HIT tool.…”

Data files accompanying our PLoS One publication by Peter Hinow (21810605)

“…The videos were digitized and the positional data were saved in .xlsx or .csv format, respectively. The python codes contain the numerical implementations of our mathematical models.…”

Comparison of MODIS and SGLI Albedo Retrievals Over the Sea of Okhotsk (January-May 2021) by Yingzhen Zhou (19723405)

“…</p><h2>Spatial Coverage:</h2><p dir="ltr">• Latitude: 40° to 64° N<br>• Longitude: 135° to 165° E</p><p><br></p><h2>Format:</h2><p dir="ltr"><br>The dataset is provided in NetCDF format (.nc), which can be read and analyzed using common geospatial and scientific data tools such as Python’s xarray or Panoply.</p>…”

Core data by Baoqiang Chen (21099509)

“…</p><p><br></p><p dir="ltr">For the 5′ UTR library, we developed a Python script to extract sequences and Unique Molecular Identifiers (UMIs) from the FASTQ files. …”

<b>Rethinking neighbourhood boundaries for urban planning: A data-driven framework for perception-based delineation</b> by Shubham Pawar (22471285)

“…</p><p dir="ltr"><b>Input:</b></p><ul><li><code>svi_module/svi_data/svi_info.csv</code> - Image metadata from Step 1</li><li><code>perception_module/trained_models/</code> - Pre-trained models</li></ul><p dir="ltr"><b>Command:</b></p><pre><pre>python -m perception_module.pred \<br> --model-weights .…”

MSc Personalised Medicine at Ulster University by Steven Watterson (100045)

“…</b> Introducing computational approaches to studying genes, proteins or metabolites, this module teaches Python coding, data analysis and how to work with the databases that support data analysis.…”

Social media images of China's terraces by Song Chen (19488280)

“…Geo-tagged images were collected using Weibo cookies and Python-based scraping tools (available at: https://github.com/dataabc/weibo-search). …”

Supplementary Data: Biodiversity and Energy System Planning - Queensland 2025 by Andrew Rogers (17623239)

“…</p><h2>Software and Spatial Resolution</h2><p dir="ltr">The VRE siting model is implemented using Python and relies heavily on ArcGIS for comprehensive spatial data handling and analysis.…”

<b>AI for imaging plant stress in invasive species </b>(dataset from the article https://doi.org/10.1093/aob/mcaf043) by Erola Fenollosa (20977421)

“…We developed a scalable, non-destructive tool for betalain research that integrates digital imaging with machine learning. …”

Nucleotide analogue tolerant synthetic RdRp mutant construct for Surveillance and Therapeutic Resistance Monitoring in SARS-CoV-2 by Tahir Bhatti (20961974)

“…Biopython: Freely available Python tools for computational molecular biology and bioinformatics. …”

Landscape17 by Vlad Carare (22092515)

“…</p><p dir="ltr">We utilized TopSearch, an open-source Python package, to perform landscape exploration, at an estimated cost of 10⁵CPUh. …”