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new implementation » _ implementation (Expand Search), pre implementation (Expand Search), model implementation (Expand Search)
code implemented » model implemented (Expand Search), have implemented (Expand Search), widely implemented (Expand Search)
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AutoDock Vina 1.2.0: New Docking Methods, Expanded Force Field, and Python Bindings
Published 2021Subjects: -
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Secure Python Code Manager: A Tool for Protected Python Code Distribution and Management
Published 2024“…</li><li><b>Source Code Protection</b>: Implement multi-level <b>source code protection</b> with dynamic <b>code obfuscation in Python</b>, making it significantly harder for others to reverse-engineer your code.…”
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EFGs: A Complete and Accurate Implementation of Ertl’s Functional Group Detection Algorithm in RDKit
Published 2025“…In this paper, a new RDKit/Python implementation of the algorithm is described, that is both accurate and complete. …”
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Re-Implementation of Refactory Tool
Published 2024“…<p dir="ltr"><b># cs539-final-project</b><br><br><b>Re-implementation of Refactory: ReFactoring_Based_Program_Repair_Applied_to_Programming_Assignments**</b><br><br>This repository contains the replication package of re-implementation of Refactory: ReFactoring_Based_Program_Repair_Applied_to_Programming_Assignments tool on Existing and New Benchmark that are Refactory and IBM CodeNet dataset respectively.…”
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DataSheet1_OSAFT Library: An Open-Source Python Library for Acoustofluidics.zip
Published 2022“…Our code is designed to be extensible. A library of fluid and solid material models facilitates the implementation of new theories. …”
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Re-Implementation of Refactory_GPT_Models Tool
Published 2024“…<pre><b># cs539-final-project</b><br><br><b>**Re-implementation of Improved Program Repair Methods using Refactoring with GPT**</b><br><br>This repository contains the replication package of re-implementation of Improved Program Repair Methods using Refactoring with GPT on Existing and New Benchmark that are Refactory and QuixBugs dataset respectively. …”
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Slides: A better strategy for interpolating gravity and magnetic data
Published 2020“…</div><div><br></div><div>The source code developed for this study is based on the EQL implementation available in Harmonica (fatiando.org/harmonica), an open-source Python library for modelling and processing gravity and magnetic data. …”
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Simple implementation examples of agent AI on free energy calculation and phase-field simulation
Published 2025“…</p> <p>Using Gibbs energy calculations and diffusion simulations as examples, we demonstrated the implementation method and usefulness of simple agent AI, where sample python codes are distributed as supplemental materials.…”
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A high-performance and highly reusable fast multipole method library and its application to solvation energy calculations at virus-scale
Published 2022“…Featuring a kernel-independent variant of FMM, ExaFMM can readily extend to new kernels. We created a high-level Python interface with a modest effort due to a straightforward and standard software design. …”
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The format of the electrode csv file
Published 2025“…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …”
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The format of the simulation reports
Published 2025“…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …”
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Comparison of BlueRecording with existing tools
Published 2025“…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …”
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The format of the weights file
Published 2025“…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …”
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