Python sript. by Kan Jia (6438599)

Modeling lung cancer AST network and its perturbation with a SOX2 degrader. (A) Lung Cancer AST Network and the corresponding stochastic equations. Parameters are , , , , , , , , w... by Ziyan Jin (21021976)

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SCADET algorithm parameter configuration (Python implementation). by Xiaolong Zhang (470454)

Cost functions implemented in Neuroptimus. by Máté Mohácsi (20469514)

“…However, using most of these software tools and choosing the most appropriate algorithm for a given optimization task require substantial technical expertise, which prevents the majority of researchers from using these methods effectively. To address these issues, we developed a generic platform (called Neuroptimus) that allows users to set up neural parameter optimization tasks via a graphical interface, and to solve these tasks using a wide selection of state-of-the-art parameter search methods implemented by five different Python packages. …”

PYTHON by Kan Jia (21666161)

Results obtained from the Bistable Gut Inflammation Detector model. by Fabricio Cravo (21387854)

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Left schematic of the XOR gate implementation [11]. by Fabricio Cravo (21387854)

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Simulated dynamics of the Mutual Annihilation protocol [26]. by Fabricio Cravo (21387854)

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Heatmap showing the simulated output of the XOR circuit by Tamsir <i>et al</i>. [11]. by Fabricio Cravo (21387854)

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(a) System dynamics: schematic representation of all the reactions in the Tree model, which are aging, reproduction, color cycle, and competition. by Fabricio Cravo (21387854)

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Simulation results for the phage communication circuit from Pathania <i>et al</i>. [5]. by Fabricio Cravo (21387854)

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Matching products with reactants for the example meta-reaction where S1 and S2 are distinct meta-species. by Fabricio Cravo (21387854)

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Simulation results of the quorum sensing circuit by Omar Din <i>et al</i>. [28]. by Fabricio Cravo (21387854)

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Secure Python Code Manager: A Tool for Protected Python Code Distribution and Management by Pavel Izosimov (20096259)

“…</li><li><b>Commercial Distribution</b>: Safely share Python code with clients or customers, implementing advanced <b>Python code protection tools</b> for sales or rentals.…”

City-level GDP estimates for China under alternative pathways from 2020 to 2100-python code by Jinjie Sun (11791715)

“…The dataset is complemented by processing code and raw input data in the "Python_Code" directory to ensure full reproducibility. …”

Comparison of performance between our next reaction implementation and the Python library from Ref. [3]. by Samuel Cure (22250922)

Resolving Harvesting Errors in Institutional Repository Migration : Using Python Scripts with VS Code and LLM Integration. by satoshi hashimoto(橋本 郷史) (18851272)

“…Therefore, we decided to create a dedicated Python program using Large Language Model (LLM)-assisted coding.…”

BSTPP: a python package for Bayesian spatiotemporal point processes by Isaac Manring (20705955)

“…<p>Spatiotemporal point process models have a rich history of effectively modeling event data in space and time. However, they are sometimes neglected due to the difficulty of implementing them. …”

PythonForRoyalSociety.py from The formation energy of triple lines by Paul Twine (22587761)

Design and implementation of DelaySSA. The input data for DelaySSA are reaction information, initial states, parameters and delays. Combining these into the simulation function, th... by Ziyan Jin (21021976)

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