Single Cell DNA methylation data for Human Brain altas MajorType allc files (CG+CH) by Wubin Ding (11823941)

“…</p><p dir="ltr">PMID: 37824674</p><p dir="ltr"><br></p><p dir="ltr">How to download</p><p dir="ltr">To quickly download the whole folder, Python package pyfigshare can be implemented. please refer to pyfigshare documentation: https://github.com/DingWB/pyfigshare</p><p dir="ltr">for example: figshare download 28424780 -o downlnoaded_data</p>…”

BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories by Elizaveta Mukhaleva (20602550)

“…We describe here the software’s uses, the methods associated with it, and a comprehensive Python interface to the underlying generalist BNM code. …”

BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories by Elizaveta Mukhaleva (20602550)

“…We describe here the software’s uses, the methods associated with it, and a comprehensive Python interface to the underlying generalist BNM code. …”

BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories by Elizaveta Mukhaleva (20602550)

“…We describe here the software’s uses, the methods associated with it, and a comprehensive Python interface to the underlying generalist BNM code. …”

High-Throughput Mass Spectral Library Searching of Small Molecules in R with NIST MSPepSearch by Andrey Samokhin (20282728)

“…Despite the availability of numerous library search algorithms, those developed by NIST and implemented in MS Search remain predominant, partly because commercial databases (e.g., NIST, Wiley) are distributed in proprietary formats inaccessible to custom code. …”

Comparison data 7 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Sample data for <i>Neolamprologus multifasciatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Sample data for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 3 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Sample data for <i>Telmatochromis temporalis</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 4 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 1 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 2 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 5 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Comparison data 6 for <i>Lamprologus ocellatus</i>. by Nicolai Kraus (19949667)

“…TIBA accepts data outputs from popular logging software and is implemented in Python and JavaScript, with all current browsers supported. …”

Supplementary file 1_ParaDeep: sequence-based deep learning for residue-level paratope prediction using chain-aware BiLSTM-CNN models.docx by Piyachat Udomwong (22563212)

“…Its efficiency and scalability make it well-suited for early-stage antibody discovery, repertoire profiling, and therapeutic design, particularly in the absence of structural data. The implementation is freely available at https://github.com/PiyachatU/ParaDeep, with Python (PyTorch) code and a Google Colab interface for ease of use.…”

<b>Anthropogenic nutrient inputs cause excessive algal growth for nearly half the world’s population</b> by Richard McDowell (7311011)

“…<p dir="ltr">Contains</p><p dir="ltr">Final Analysis Output.xlsx: Current and reference concentrations of DRP, TP, NO3-N and TN along with pivot table analysis</p><p dir="ltr">Code: Python code used to implement the model in ArcGIS Pro.…”

Artifact for the IJCAI 2024 paper "Solving Long-run Average Reward Robust MDPs via Stochastic Games" by Krishnendu Chatterjee (15367413)

“…<br></pre></pre><h2>Structure and How to run</h2><p dir="ltr">There are four Python files in the repository.</p><pre><pre>(i) `StrategyIteration.py` is the backend code, containing the implementation of the RPPI algorithm described in the paper.…”

HCC Evaluation Dataset and Results by Jens-Rene Giesen (18461928)

“…</p><h3>Report Script</h3><p dir="ltr">On the top-level directory you find a <code>report.py</code> file, which is an executable Python script. …”

Data and software for "Social networks affect redistribution decisions and polarization" by Milena Tsvetkova (11217969)

“…</p><p dir="ltr">The repository contains data in .csv and .xlsx format, model code in .nlogox Netlogo format, analysis code in .ipynb Jupyter notebooks, and helping code in .py Python files.…”