Python file of the computational framework. by Benoit Haut (9753029)

An example Python input file for the CA4 binder design. by Jakub Lála (17136205)

Python implementation of the Trajectory Adaptive Multilevel Sampling algorithm for rare events and improvements by Pascal Wang (10130612)

“…</div><div><br></div><div>The `TAMS` folder contains the necessary files to run the TAMS algorithm. The `main.py` file is the file to be executed using a command of the type `python main.py`. …”

S1 File - by Leyla Noroozbabaee (14100772)

Morris and Sobol Sensitivity Analyses of Composite Indicators Calculated Using the Ideal Point Aggregation Function (ver. 01) - Python Code by Arika Ligmann-Zielinska (14669582)

Python implementation of a wildfire propagation example using m:n-CAk over Z and R. by Pau Fonseca i Casas (9507338)

Building a Federated Data Catalog with Client Implementations - Meeting Data Where It is by Mike Johnson (16616871)

“…</p> <p>This combination of a <strong>auto-refreshing</strong> catalog paired with <strong>multi language implementations</strong> (R and Python), allowed the catalog to grow its data holdings from 11 to over 2,000 data providers and share the catalog as JSON and parquet files from a <em>github.io</em> page. …”

Total epithelial chloride fluxes for the W-PCT-E model. by Leyla Noroozbabaee (14100772)

WEDAP: A Python Package for Streamlined Plotting of Molecular Simulation Data by Darian T. Yang (12321348)

“…Here, we present the WEDAP Python package for simplifying the analysis of data generated from either conventional MD simulations or the weighted ensemble (WE) path sampling method, as implemented in the widely used WESTPA software package. …”

A Python Package for the Localization of Protein Modifications in Mass Spectrometry Data by Anthony S. Barente (14035175)

“…Here we describe pyAscore, an efficient and versatile implementation of the Ascore algorithm in Python for scoring the localization of user defined PTMs in data dependent mass spectrometry. pyAscore can be used from the command line or imported into Python scripts and accepts standard file formats from popular software tools used in bottom-up proteomics. …”

Reproducible implementation for article: Reproducibility study of the modular and reusable model of epithelial transport in the proximal convoluted tubule by Leyla Noroozbabaee (14301173)

Python scripts and notebooks by Ismail Belgacem (20845811)

Secure Python Code Manager: A Tool for Protected Python Code Distribution and Management by Pavel Izosimov (20096259)

“…</li><li><b>Commercial Distribution</b>: Safely share Python code with clients or customers, implementing advanced <b>Python code protection tools</b> for sales or rentals.…”

The Python Software Quality Dataset by Liviu Marian Berciu (17797934)

“…<p dir="ltr">This content represents the dataset of the article "The Python Software Quality Dataset". …”

S1 File - by James C. Young (18404677)

S2 File - by James C. Young (18404677)

PCA-RF Python codes.txt by Junming Li (19324492)

“…<p dir="ltr">This text file is the PCA-RF model’s Python code. You can implement it in the Jupyter notebook.…”

SecurityGuidelinesRetrievalForPythonCodeGen by Catherine Tony (18368913)

“…Using Task-Specific Guidelines for Secure Python Code Generation: Replication Package"</p><p dir="ltr">This replication package contains SecGuide along with the results of each step followed in its creation, the scripts that implement all the prompting approaches and the code generated by the LLMs using these approaches. …”

Non-exhaustive overview of the functionality offered by the different toolboxes currently supporting the PEtab format. by Leonard Schmiester (8327379)

Python script file from Analysing the impact of global demographic characteristics over the COVID-19 spread using class rule mining and pattern matching by Wasiq Khan (10046344)