Image_2_Directional preference for glioblastoma cancer cell membrane encapsulated nanoparticle population: A probabilistic approach for cancer therapeutics.png by Saif Khan (795180)

“…</p>Materials and methods<p>A probabilistic model based on binding scores and differential expression levels of Glioblastoma cancer cells (GCC) membrane proteins (factors and receptors) was implemented on python 3.9.1. Conditional binding efficiency (CBE) was derived for each combination of protein involved in the interactions. …”

Data_Sheet_1_CNN stability training improves robustness to scanner and IHC-based image variability for epithelium segmentation in cervical histology.docx by Felipe Miranda Ruiz (16493391)

“…</p>Conclusion<p>CST offers a path to improve CNN performance without the need for more data and allows customizing distortions to specific use cases. A python implementation of CST is publicly available at https://github.com/TIGACenter/CST_v1.…”

SpatialKNifeY analysis landscape. by Shunsuke A. Sakai (13789939)

“…(B) Implementation of SpatialKNifeY (SKNY). A Python library of SKNY depends on stlearn [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012854#pcbi.1012854.ref023" target="_blank">23</a>] and scanpy [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012854#pcbi.1012854.ref009" target="_blank">9</a>] functions (see “Methods”) and AnnData object programming [<a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1012854#pcbi.1012854.ref010" target="_blank">10</a>]. …”

Presentation: Evaluating the accuracy of equivalent-source predictions using cross-validation by Leonardo Uieda (97471)

“…<br></p><p>Open-source software implementations of the equivalent-source and blocked cross-validation (in progress) methods are available in the Python libraries Harmonica and Verde, which are part of the Fatiando a Terra project (<a href="https://www.fatiando.org/" rel="nofollow">www.fatiando.org</a>).…”

Data_Sheet_1_Automated detection of cerebral microbleeds on MR images using knowledge distillation framework.pdf by Vaanathi Sundaresan (9560959)

“…When evaluating across different datasets, our method showed good generalizability with a cluster-wise TPR >80 % with different modalities. The python implementation of the proposed method is openly available.…”

<b>Disrupted stimulus encoding shapes tactile perception in autism.</b> (data) by Ourania Semelidou (19178362)

“…Analog and digital inputs sent by Bpod and the piezoelectric sensor controller were collected and saved as timestamps by the microscope and were used to synchronize the behavioral events with the calcium traces from imaging.</p>…”

Data_Sheet_1_Decoding emotional resilience in aging: unveiling the interplay between daily functioning and emotional health.PDF by Minhua Guo (18392646)

“…Machine learning algorithms, including Support Vector Machine (SVM), Decision Tree (DT), and Logistic Regression (LR), were implemented using Python 3.10.2.</p>Results<p>Population demographic analysis revealed a significantly lower average BI score of 65.044 in the “Diagnosed with Emotional Problems by a Doctor” group compared to 85.128 in the “Not diagnosed with Emotional Problems by a Doctor” group. …”

Measuring factors affecting honey bee attraction to soybeans using bioacoustics monitoring by Karlan Forrester (17484165)

“…The wingbeat frequency of honey bees (234±13.9 Hz) was identified first using an automated method implemented in Python and using the package scikit-maad. …”

The Flower Crown Task: Categorical Perception of VOT in Multilingual K2 Children in Singapore by Han Ke (14807917)

“…As preregistered, the fixed effect(s) of language input will be implemented using the significant factor(s) arising from the PCA of CLIP and CLOP as predictor(s) of an individual’s slope value, along with random effects for each participant. …”

Data for "Elementary Decomposition Mechanisms of Lithium Hexafluorophosphate in Battery Electrolytes and Interphases" by Evan Walter Clark Spotte-Smith (10313582)

“…</p> <p><br></p> <p>To load this data in Python, use monty (<a href="https://github.com/materialsvirtuallab/monty" target="_blank">https://github.com/materialsvirtuallab/monty</a>):</p> <p><br></p> <p>from monty.serialization import loadfn</p> <p>data = loadfn("pfx_named_data.json")</p>…”

Global 1-km present and future hourly anthropogenic heat flux by Alvin Christopher Varquez (8701623)

“…GeoTIFFs can be further analyzed or process using any GIS software or programming tools, such as R or Python.</p><p><br></p><p>Files prefixed "AHE_2010_" and "AHE_2050_" correspond to anthropogenic heat emissions for 2010s and 2050s, respectively. …”

CNG-ARCO-RADAR.pdf by Alfonso Ladino (21447002)

“…This approach uses a suite of Python libraries, including Xarray (Xarray-Datatree), Xradar, and Zarr, to implement a hierarchical tree-like data model. …”

DataSheet_1_Prediction of Locoregional Recurrence-Free Survival of Oesophageal Squamous Cell Carcinoma After Chemoradiotherapy Based on an Enhanced CT-Based Radiomics Model.docx by Jie Kong (702788)

“…The enhanced computed tomography scan images of the patients were imported into 3D-slicer software (version 4.8.1), and the radiomic features were extracted by the Python programme package. In the training group, the dimensionality reduction of the radiomic features was implemented by Lasso regression, and then a radiological label, the model of predicting LRFS, was established and evaluated. …”

“Genie Replication Package: Resolution of Kryptos K4 via Berlin Clock Route and Substitution Funnel” by Alan Glanz (22109698)

“…</li></ul></li></ol><h3>Contributions</h3><ul><li>Provides a <b>self-contained Python package</b> enabling independent replication and stress-testing of the solution.…”

Globus Automate: A Distributed Research Automation Platform by Ryan Chard (6681857)

“…In this talk will present Globus Automate, its architecture and prototype implementation. We will frame this talk in the context of a real-world neurocartography use case in which Globus Automate is used to perform a complex image reconstruction and analysis pipeline using data obtained from Argonne National Laboratory's Advanced Light Source. …”

<b>Altered cognitive processes shape tactile perception in autism.</b> (data) by Ourania Semelidou (19178362)

“…</p><p dir="ltr">The perceptual decision-making data were collected from 5 different cohorts of mice at different time-points during their active phase of the day. …”

Mean Annual Habitat Quality and Its Driving Variables in China (1990–2018) by ChenXi Zhu (21374876)

“…</p><p dir="ltr">(HQ: Habitat Quality; CZ: Climate Zone; FFI: Forest Fragmentation Index; GPP: Gross Primary Productivity; Light: Nighttime Lights; PRE: Mean Annual Precipitation Sum; ASP: Aspect; RAD: Solar Radiation; SLOPE: Slope; TEMP: Mean Annual Temperature; SM: Soil Moisture)</p><p dir="ltr"><br>A Python script used for modeling habitat quality, including mean encoding of the categorical variable climate zone (CZ), multicollinearity testing using Variance Inflation Factor (VIF), and implementation of four machine learning models to predict habitat quality.…”

Decoding fairness motivations - repository by Sebastian Speer (6489207)

“…All analysis were conducted in Python 2.7.</div><div><br></div><div><b>Behavioral Data:</b><br></div><div><br></div><div><u>Files:</u> </div><div><br></div><div><i>DifffereceOffers.csv </i>- Offers made by participants in Study 1</div><div><i>Diffs_W.csv</i> - Offers made by participants in Study 2</div><div><br></div><div><i>Individual-differences-in-offers2.png</i> - Plot of individual differences as illustrated in the paper</div><div><i>Individual-differences-MeanOffers.png </i>- Individual differences in mean offers in both games as illustrated in the Appendix</div><div><i>SocialvsNonSocial2.png </i>- Difference in Offers between Selfish and strategic players when playing against humans and computers</div><div><br></div><div>Behavioral Data, specfically Ultimatum Game and Dictator Game Offers and Plots resulting from behavioral analysis reported in the following paper:</div><div><br></div><div>S.P.H. …”

Mapping Policy Coherence in National UK Food Systems (2008– 2024): Analysing the Integration of Climate Change Mitigation and Adaptation Strategies, LEAP 2025 conference, Oxford by Ronja Teschner (20974180)

“…</p><p dir="ltr">This study aims to:</p><p dir="ltr">1) Identify and map UK national food policies regarding climate change mitigation and adaption strategies from 2008 - 2024.</p><p dir="ltr">2) Highlight departments responsible for publication, thematic areas addressed in the policies, policy objectives and implementation strategies.…”