Multisession fNIRS-EEG data of Post-Stroke Motor Recovery: Recordings During Intact and Paretic Hand Movements by Aleksandra Medvedeva (21221383)

“…The fNIRS .snirf files are accompanied by event files as .txt tables, containing arrays of event timestamps and corresponding event codes. The code for signal reading, preprocessing, and epoching is provided with the dataset in the “Preprocessing” file. …”

Collaborative Research: Framework: Improving the Understanding and Representation of Atmospheric Gravity Waves using High-Resolution Observations and Machine Learning by Joan Alexander (17047170)

“…Establishing a framework for implementing and testing ML-based parameterizations in atmospheric models. …”

Thermally Activated Resonant Tunnelling in GaAs/AlGaAs Triple Barrier Heterostructures by Craig Allford (19079081)

“…Measurements were automated using bespoke written python code.<br><br>Results are published in the article at http://iopscience.iop.org/0268-1242/30/10/105035 <br>…”

<b>Challenges and Strategies for the Management of Quality-Oriented Education Bases in Universities under Informatization Background</b> by Yang Yanxi (21571568)

“…Final codes, together with basic demographic attributes supplied by the institutions’ HR offices, were exported to Excel and cleaned in Python 3.10 using pandas 2.2.1 and numpy 1.26. …”

GeoGraphNetworks: Shapefile-Derived Datasets for Accurate and Scalable Graphical Representations by Harish Sharma (18881935)

“…The rail line infrastructure of the USA is represented as a single network that covers the entire country and includes connectivity to Canada. …”

<b>Dataset for manuscript: </b><b>Phylogenetic and genomic insights into the evolution of terpenoid biosynthesis genes in diverse plant lineages</b> by Puguang Zhao (19023065)

“…</p><p dir="ltr"> 'boxplot.py': This script is executed in Visual Studio Code, using Python 3.10.4 as the runtime environment.…”

Oka et al., Supplementary Data for "Development of a battery emulator using deep learning model to predict the charge–discharge voltage profile of lithium-ion batteries" by Kanato Oka (20132185)

“…(<b>DOI:</b> 10.1038/s41598-024-80371-9 )<br><br>A zip file contains following data and codes.</p><p dir="ltr"><br></p><p dir="ltr">01_lstm_model_making.py</p><p dir="ltr">This file is a Python script for reading battery charge-discharge data and training an LSTM model. …”

DA-Faster-RCNN code by Seunghyeon Wang (16500132)

“…<p dir="ltr">This repository provides the code used in the paper “Domain-Adaptive Faster R-CNN for Non-PPE Identification on Construction Sites from Body-Worn and General Images.” The implementation is written in Python using PyTorch and Detectron2.…”

Dataset for: Phylotranscriptomics reveals the phylogeny of Asparagales and the evolution of allium flavor biosynthesis, Nature Communications，DOI：10.1038/s41467-024-53943-6 by Xiao-Xiao Wang (2447920)

“…Extract homologs for all the 501 samples</p><p dir="ltr"><i>python2 blast_to_mcl.py all.rawblast 0.25 >mcl_all_rawblast_out_nohup_out_0.25</i></p><p dir="ltr"><i>mcl mcl_all_rawblast_out_nohup_out_0.25 --abc -te 80 -tf 'gq(5)' -I 1.5 -o hit-frac0.25_I1.5_e5</i></p><p dir="ltr"><i>python2 write_fasta_files_from_mcl.py all.fa hit-frac0.25_I1.5_e5 minimal_taxa outDIR</i></p><p><br></p><p dir="ltr"><b>Step 5: Build Maximum likelihood tree for each homolog group</b></p><p dir="ltr"><i>python2 fasta_to_tree_pxclsq.py fasta_dir number_cores dna bootstrap(y)</i></p><p><br></p><p dir="ltr"><b>Step 6: Extract ortholog groups</b></p><p dir="ltr">Instead of 1to1, MI, RT, or MO methods in Ya et al. (2014), we used a revised version of DISCO (https://github.com/JSdoubleL/DISCO) to infer homologs. …”

Spotted owl habitat quality maps and disturbance attribution analysis by Josh Barry (7573823)

“…Users may derive annual gains or losses in habitat quality from these layers and apply the provided ArcPython workflow (nest_fire_zonal_stats.py) to attribute change to specific disturbance drivers. …”

Social media images of China's terraces by Song Chen (19488280)

“…Geo-tagged images were collected using Weibo cookies and Python-based scraping tools (available at: https://github.com/dataabc/weibo-search). …”

adnus by Mehmet Keçeci (14301782)

“…<p dir="ltr">adnus (AdNuS): Advanced Number Systems</p><p dir="ltr">adnus is a Python library that provides an implementation of various advanced number systems. …”

Bacterial persistence modulates the speed, magnitude and onset of antibiotic resistance evolution by Giorgio Boccarella (22810952)

“…This file can be used together with the analysis code (link to be added upon publication) to generate all figures.…”

Data and software for "Social networks affect redistribution decisions and polarization" by Milena Tsvetkova (11217969)

“…<p dir="ltr">Data from agent based models and experiments with human participants recruited from Prolific, together with code for the models and analysis. …”

Data files accompanying our PLoS One publication by Peter Hinow (21810605)

“…The videos were digitized and the positional data were saved in .xlsx or .csv format, respectively. The python codes contain the numerical implementations of our mathematical models.…”

World Heritage documents reveal persistent gaps between climate awareness and local action by Yang Chen (20756166)

“…The documents are sourced from publicly available official reports. The analysis section includes a GLM model implemented in R, along with evaluation tools such as correlation heatmaps, ICC agreement analysis, and MCC-based binary classification assessment. …”

A Structured Attempt at a Polynomial-Time Solution to the Subset Sum Problem and Its Implications for P vs NP by MInakshi Aggarwal (21677633)

“…The manuscript includes theoretical formulation, Python implementation, verified output snapshots, and detailed analysis — aimed at opening fresh discourse on the P vs NP question. …”

Automatic data reduction for the typical astronomer by Bradford Holden (21789524)

“…<p dir="ltr">The PypeIt data reduction pipeline (DRP) is a Python-based software package designed to transform “raw” spectroscopic data from an astronomical spectrometer into calibrated, science-ready products. …”

DataSheet1_Prostruc: an open-source tool for 3D structure prediction using homology modeling.PDF by Shivani V. Pawar (20355171)

“…</p>Methods<p>Prostruc is a Python-based homology modeling tool designed to simplify protein structure prediction through an intuitive, automated pipeline. …”

DataSheet1_Prostruc: an open-source tool for 3D structure prediction using homology modeling.PDF by Shivani V. Pawar (20355171)

“…</p>Methods<p>Prostruc is a Python-based homology modeling tool designed to simplify protein structure prediction through an intuitive, automated pipeline. …”