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model presented » model predicted (Expand Search)
python model » python tool (Expand Search), action model (Expand Search), motion model (Expand Search)
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Comparison of BlueRecording with existing tools
Published 2025“…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …”
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The format of the weights file
Published 2025“…To enable efficient calculation of extracellular signals from large neural network simulations, we have developed <i>BlueRecording</i>, a pipeline consisting of standalone Python code, along with extensions to the Neurodamus simulation control application, the CoreNEURON computation engine, and the SONATA data format, to permit online calculation of such signals. …”
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Cost functions implemented in Neuroptimus.
Published 2024“…To address these issues, we developed a generic platform (called Neuroptimus) that allows users to set up neural parameter optimization tasks via a graphical interface, and to solve these tasks using a wide selection of state-of-the-art parameter search methods implemented by five different Python packages. Neuroptimus also offers several features to support more advanced usage, including the ability to run most algorithms in parallel, which allows it to take advantage of high-performance computing architectures. …”
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Schematic of the approach: This schematic illustrates the entire workflow of the project.
Published 2025Subjects: -
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Resolving Harvesting Errors in Institutional Repository Migration : Using Python Scripts with VS Code and LLM Integration.
Published 2025“…Therefore, we decided to create a dedicated Python program using Large Language Model (LLM)-assisted coding.…”
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Optimizing Neuronal Calcium Flux Analysis: A Python Framework for Alzheimer's and TBI Studies
Published 2025“…<p dir="ltr">This study presents a Python-based framework for analyzing calcium flux in cortical neurons, particularly in the context of Alzheimer’s disease and traumatic brain injury (TBI). …”
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Data&Codes.zip
Published 2025“…</p><p dir="ltr">To facilitate the widespread use of the proposed framework, we have implemented it as the <b><i>ESLocalIndi</i></b> open-source package in Python, making it easily accessible to geographers. …”
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Code and data for reproducing the results in the original paper of DML-Geo
Published 2025“…<p dir="ltr">This asset provides all the code and data for reproducing the results (figures and statistics) in the original paper of DML-Geo</p><h2>Main Files:</h2><p dir="ltr"><b>main.ipynb</b>: the main notebook to generate all the figures and data presented in the paper</p><p dir="ltr"><b>data_generator.py</b>: used for generating synthetic datasets to validate the performance of different models</p><p dir="ltr"><b>dml_models.py</b>: Contains implementations of different Double Machine Learning variants used in this study.…”