Validation of MCell4 simulation against BioNetGen/NFsim and MCell3R using a model of CaMKII. by Adam Husar (18437351)

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Modeling with uniform <i>σ</i> values. by Giacomo Janson (8138517)

GraSPy: an Open Source Python Package for Statistical Connectomics by Benjamin Pedigo (6580352)

“…We developed GraSPy, an open-source Python toolkit for statistical inference on graphs. …”

Simulation of a circiadian clock. by Adam Husar (18437351)

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Comparison of running times of different simulators in a SARS-CoV-2 scenario using different evolutionary models. by Nicola De Maio (233448)

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SCADET algorithm parameter configuration (Python implementation). by Xiaolong Zhang (470454)

Model and difference electron density maps. by Sen Yao (4441738)

Heat-map in this figure represented as row and columns. by Solomon Shiferaw Beyene (9143178)

Python code. by Kapil Newar (6533048)

Evaluation of results from the Somatic Features Test of HippoUnit applied to published models. by Sára Sáray (10053139)

Listed python codes of our algorithm with explanations (Python 3.9 recommended). by Takayuki Niizato (162226)

Comparison of running times of Indelible and phastSim simulators in a SARS-CoV-2 scenario with indels. by Nicola De Maio (233448)

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Example genome search tree and its use. by Nicola De Maio (233448)

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Comparison of tools with features similar to <i>bmdrc,</i> and a descriptions of the modules within the <i>bmdrc</i> package.  by David J. Degnan (13886280)

“…The smaller boxes within the larger boxes represent individual functions within the <i><i>bmdrc</i></i> Python library.…”

Utilizing variable background weight maps for training the model on debris. by Owen M. O’Connor (11965460)

Heat-map in this figure represented as row-normalized <i>k</i>-mer counting distribution. by Solomon Shiferaw Beyene (9143178)

Example plots of AV values for data with per-frame tracking errors. by Ian L. Morgan (11890568)

Morris and Sobol Sensitivity Analyses of Composite Indicators Calculated Using the Ideal Point Aggregation Function (ver. 01) - Python Code by Arika Ligmann-Zielinska (14669582)

Conceptual of integrating FEM simulation in a Python scripting interface. by Chang Soon Kim (17480874)

Type I error rate for a hierarchical randomization test based on the studentized covariance and a linear mixed model. by Rishikesh U. Kulkarni (2881697)