Reproducible implementation for article: Reproducibility study of the modular and reusable model of epithelial transport in the proximal convoluted tubule حسب Leyla Noroozbabaee (14301173)

Simple steps to use the FastCloneAssist tool. حسب Pradip Kumar Singh (20875050)

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List of primers designed using FastCloneAssist tool. حسب Pradip Kumar Singh (20875050)

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EthoPy: Reproducible Behavioral Neuroscience Made Simple حسب Alexandros Evangelou (22235917)

"…To overcome these challenges, we developed EthoPy, an open-source, Python-based behavioral control framework that integrates stimulus presentation, hardware management, and data logging. …"

Python code for calculating diversity measures and correlations. حسب Niloufar Abhari (20384374)

DynamiSpectra: A Python Software Package and Web Platform for Molecular Dynamics Data Analysis in Computational Biology حسب Iverson Conrado Bezerra (19555596)

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DynamiSpectra: A Python Software Package and Web Platform for Molecular Dynamics Data Analysis in Computational Biology حسب Iverson Conrado Bezerra (19555596)

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Introduction to Python for getting things done حسب John Porter (7046763)

Script_FastCloneAssist_Colab_VS02.ipynb. حسب Pradip Kumar Singh (20875050)

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Script_FastCloneAssist_VS02.ipynb. حسب Pradip Kumar Singh (20875050)

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Example Report for FC_Class 1.txt. حسب Pradip Kumar Singh (20875050)

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FastCloneAssist primer design scheme. حسب Pradip Kumar Singh (20875050)

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Example sequences from the case study. حسب Pradip Kumar Singh (20875050)

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Example Report for FC_Class 2.txt. حسب Pradip Kumar Singh (20875050)

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PyGMT – Accessing and Integrating GMT with Python and the Scientific Python Ecosystem (AGU24, U12B-05) حسب Yvonne Fröhlich (20442683)

"…<p dir="ltr"><b>Abstract</b></p><p dir="ltr">The Generic Mapping Tools (GMT) are widely used across the Earth, Ocean, and Planetary Sciences and beyond to process geospatial and geophysical data as well as produce high-quality (static) vector and raster plots and maps. …"

FibrilGen: A Python Package for Atomistic Modeling of Peptide β‑Sheet Nanostructures حسب Chao-Yu Yang (847201)

"…For <i>de novo</i> peptide-based nanomaterials that rely on the rational design of the peptide primary sequence, a systematic approach to computationally model the diverse and complex potential nanostructures formed by self-assembling peptides would be of considerable value. Here, we present FibrilGen, a bespoke Python package capable of building a broad range of cross-β morphologies at the atomic level. …"

FibrilGen: A Python Package for Atomistic Modeling of Peptide β‑Sheet Nanostructures حسب Chao-Yu Yang (847201)

"…For <i>de novo</i> peptide-based nanomaterials that rely on the rational design of the peptide primary sequence, a systematic approach to computationally model the diverse and complex potential nanostructures formed by self-assembling peptides would be of considerable value. Here, we present FibrilGen, a bespoke Python package capable of building a broad range of cross-β morphologies at the atomic level. …"

Photoelectron Metrology (LBNL Oct 2024) حسب Paul Hockett (100955)

"…The work is enabled by various tools on both the theory and experimental side; recent work has focussed on the development of a suite of open-source python tools - the Photoelectron Metrology Toolkit - and application to various problems, and this will form the main topic of the talk. …"

Data Sheet 1_osl-ephys: a Python toolbox for the analysis of electrophysiology data.docx حسب Mats W. J. van Es (20762876)

"…This toolbox builds on top of the widely used MNE-Python package and provides unique analysis tools for magneto−/electro-encephalography (M/EEG) sensor and source space analysis, which can be used modularly. …"

HaPy-Bug – Human Annotated Python Bug Resolution Dataset حسب Piotr Przymus (14564009)

"…<p dir="ltr">We present HaPy-Bug, a curated dataset of 793 Python source code commits associated with bug fixes, with each line of code annotated by three domain experts. …"