ProSmith outperforms previous models in the prediction of Michaelis constants <i>K</i>_M especially for enzymes not highly similar to proteins in the training set. by Alexander Kroll (9304225)

Subjects:

Data_Sheet_1_An Open-Source Tool for Anisotropic Radiation Therapy Planning in Neuro-oncology Using DW-MRI Tractography.pdf by Kesshi Jordan (7329089)

“…We present an open-source WMPL tool, implemented in the package Diffusion Imaging in Python (DIPY), and code to convert the resulting WMPL map to anisotropic contours for RT in a commercial treatment planning system. …”

Python code for ray-tracing through Cartesian surfaces by Alberto Silva (8373543)

Schematic example of multiscale modelling implementation. by Robyn M. Stuart (3754000)

Local Python Code Protector Script: A Tool for Source Code Protection and Secure Code Sharing by Pavel Izosimov (20096259)

“…</p><h2>Key Features</h2><ul><li><a href="https://xn--mxac.net/secure-python-code-manager.html" target="_blank"><b>Code Obfuscation in Python</b></a>: Implements multi-level protection with dynamic encryption and obfuscation techniques, making it an effective <a href="https://xn--mxac.net/secure-python-code-manager.html" target="_blank"><b>Python obfuscator</b></a>.…”

A Cell-Based, Dynamic Flow Direction Model (DFD Model) for Water Balance Calculations Simulating Overland Runoff through Depressions Implemented using Python and GIS by Zhentao Wang (13042179)

“…<p>A Cell-Based, Dynamic Flow Direction Model (DFD Model) for Water Balance Calculations Simulating Overland Runoff through Depressions Implemented using Python and GIS</p>…”

Multi-Version PYZ Builder Script: A Universal Python Module Creation Tool by Pavel Izosimov (20096259)

“…</li></ul><p dir="ltr"><b>Application Areas</b></p><p dir="ltr">The <b>Multi-Version PYZ Builder Script</b> can be effectively applied in various areas:</p><ul><li><b>Commercial Distribution</b>: Distribute protected Python code to clients or customers, implementing advanced <a href="https://xn--mxac.net/secure-python-code-manager.html" target="_blank"><b>source code protection</b></a> for sales or rentals.…”

Parameters and units for the Microbial Consumer Resource Model. by Robert Marsland (8616483)

Reproducible implementation for article: Reproducibility study of the modular and reusable model of epithelial transport in the proximal convoluted tubule by Leyla Noroozbabaee (14301173)

BOFdat: Generating biomass objective functions for genome-scale metabolic models from experimental data by Jean-Christophe Lachance (6619307)

“…To fill this gap in the metabolic modeling software ecosystem, we implemented BOFdat, a Python package for the definition of a <b>B</b>iomass <b>O</b>bjective <b>F</b>unction from experimental <b>dat</b>a. …”

Invert4Geom; Progress towards an open-source geometric gravity inversion with stochastic uncertainty analysis by Matt Tankersley (11769215)

“…Here, we present a preliminary inversion algorithm written in Python to perform these geometric style of gravity inversions. …”

Comparison of performance between our next reaction implementation and the Python library from Ref. [3]. by Samuel Cure (22250922)

PyRates—A Python framework for rate-based neural simulations by Richard Gast (8129451)

“…In this work, we present PyRates, a Python framework that provides the means to build a large variety of rate-based neural models. …”

The MQTT test broker with Python program. by Yazid Saif (17144817)

Python programming code for the stochastic inference of disease interval distributions. by Günter Schneckenreither (10099380)

Python implementation for image-based ERT inversion using ViT, CNN, UNet, and LDM models, and related data conversion and visualization by Huichao Yin (14589020)

“…<p dir="ltr">Python implementation for image-based ERT inversion using ViT, CNN, UNet, and LDM models, and related data conversion and visualization.…”

Example of loading and running BNGL model in MCell4. by Adam Husar (18437351)

“…<p>Python code for an MCell4 model that will implement loading of the BNGL file shown in <a href="http://www.ploscompbiol.org/article/info:doi/10.1371/journal.pcbi.1011800#pcbi.1011800.g010" target="_blank">Fig 10</a> (referenced as subsystem.bngl). …”

Boundary-value problems and solutions for the examined numerical models. by Xuzhen He (14676114)

Subjects:

PYTHON by Kan Jia (21666161)

Five Operator Lattice Simulation by James McDaniel (22522571)

“…<p dir="ltr">This dataset contains the Python simulation code and supporting documentation for the paper <i>A Five-Operator Lattice of Consciousness: A Logical Framework for Mediation Between Implicit and Explicit Processing</i> (McDaniel, 2025).…”