Data and code for: Automatic fish scale analysis by Christian Vogelmann (21646472)

“…</p><h3>Includeed in this repository:</h3><ul><li><b>Raw data files:</b></li><li><code>comparison_all_scales.csv</code> – comparison_all_scales.csv - manually verified vs. automated measurements of 1095 coregonid scales</li></ul><ul><li><ul><li><code>Validation_data.csv</code> – manually measured scale data under binocular</li><li><code>Parameter_correction_numeric.csv</code> – calibration data (scale radius vs. fish length/weight)</li></ul></li><li><b>Statistical results:</b></li><li><ul><li><code>comparison_stats_core_variables.csv</code> – verification statistics (bias, relative error, limits of agreement)</li><li><code>Validation_statistics.csv</code> – summary statistics and model fits (manual vs. automated)</li></ul></li><li><b>Executable script (not GUI):</b></li><li><ul><li><code>Algorithm.py</code> – core processing module for scale feature extraction<br>→ <i>Note: The complete Coregon Analyzer application (incl. …”

A comparison between the static Python-based visualizations of the p65 activity in activated fibroblasts and the dynamic, HTML-based visualizations that use these same reduction me... by Hector Torres (11708207)

“…<p><b>(a)</b> UMAP, t-SNE, PCA, and Diffmap were first generated using the Python libraries Scikit-learn, UMAP, and PyDiffmap within Jupyter to generate static graphs as a starting point. …”

Efficient, Hierarchical, and Object-Oriented Electronic Structure Interfaces for Direct Nonadiabatic Dynamics Simulations by Sascha Mausenberger (22225772)

“…We present a novel, flexible framework for electronic structure interfaces designed for nonadiabatic dynamics simulations, implemented in Python 3 using concepts of object-oriented programming. …”

Code and data for reproducing the results in the original paper of DML-Geo by Pengfei CHEN (8059976)

“…<p dir="ltr">This asset provides all the code and data for reproducing the results (figures and statistics) in the original paper of DML-Geo</p><h2>Main Files:</h2><p dir="ltr"><b>main.ipynb</b>: the main notebook to generate all the figures and data presented in the paper</p><p dir="ltr"><b>data_generator.py</b>: used for generating synthetic datasets to validate the performance of different models</p><p dir="ltr"><b>dml_models.py</b>: Contains implementations of different Double Machine Learning variants used in this study.…”

Data for "A hollow fiber membrane permeance evaluation device demonstrating outside-in and inside-out performance differences" by Timothy Warner (20222838)

“…</li><li>Flux decline data generated by the analysis software.</li><li>Plot data derived from the above data sources.</li><li>Python code to generate figures from the plot data.…”

Data sets and coding scripts for research on sensory processing in ADHD and ASD by Vesko Varbanov (9687029)

“…The repository includes raw and matched datasets, analysis outputs, and the full Python code used for the matching pipeline.</p><h4>Ethics and Approval</h4><p dir="ltr">All procedures were approved by the University of Sheffield Department of Psychology Ethics Committee (Ref: 046476). …”

Code for High-quality Human Activity Intensity Maps in China from 2000-2020 by Wenqi Xie (18273238)

“…<p dir="ltr">Code and remote sensing images and interpretation results of the samples for uncertainty analysis for "High-quality Human Activity Intensity Maps in China from 2000-2020"</p><p dir="ltr">“Mapping_HAI.py”：We generated the HAI maps using ArcGIS 10.8, and the geoprocessing tasks were implemented using Python 2.7 with the ArcPy library (ArcGIS 10.8 + Python 2.7 environment). …”

The codes and data for "Lane Extraction from Trajectories at Road Intersections Based on Graph Transformer Network" by Chongshan Wan (19247614)

“…Each lane includes 'geometry' and 'inter_id' attributes.</li></ul><h2>Codes</h2><p dir="ltr">This repository contains the following Python codes：</p><ul><li>`data_processing.py`: Contains the implementation of data processing and feature extraction. …”

MATH_code : False Data Injection Attack Detection in Smart Grids based on Reservoir Computing by Carl-Hendrik Peters (21530624)

“…</li><li><b>3_literature_analysis_and_mapping.ipynb</b><br>Contains the Python code used for executing the systematic mapping study (SMS), including automated processing of literature data and thematic clustering.…”

Evaluation and Statistical Analysis Code for "Multi-Task Learning for Joint Fisheye Compression and Perception for Autonomous Driving" by Basem Ahmed (18127861)

“…</li></ul><p dir="ltr">These scripts are implemented in Python using the PyTorch framework and are provided to ensure the reproducibility of the experimental results presented in the manuscript.…”

Monte Carlo Simulation Code for Evaluating Cognitive Biases in Penalty Shootouts Using ABAB and ABBA Formats by Raul MATSUSHITA (10276562)

“…<p dir="ltr">This Python code implements a Monte Carlo simulation to evaluate the impact of cognitive biases on penalty shootouts under two formats: ABAB (alternating shots) and ABBA (similar to tennis tiebreak format). …”

Segmentation module training details. by Khelina Fedorchuk (19130089)

The codes and data for "A Graph Convolutional Neural Network-based Method for Predicting Computational Intensity of Geocomputation" by FirstName LastName (20554465)

“…The <b>innovations</b> and <b>steps</b> in Case 3, including data download, sample generation, and parallel computation optimization, were independently developed and are not dependent on the GeoCube’s code.</p><h2>Requirements</h2><p dir="ltr">The codes use the following dependencies with Python 3.8</p><ul><li>torch==2.0.0</li><li>torch_geometric==2.5.3</li><li>networkx==2.6.3</li><li>pyshp==2.3.1</li><li>tensorrt==8.6.1</li><li>matplotlib==3.7.2</li><li>scipy==1.10.1</li><li>scikit-learn==1.3.0</li><li>geopandas==0.13.2</li></ul><p><br></p>…”

The codes and data for "A Graph Convolutional Neural Network-based Method for Predicting Computational Intensity of Geocomputation" by FirstName LastName (20554465)

“…The <b>innovations</b> and <b>steps</b> in Case 3, including data download, sample generation, and parallel computation optimization, were independently developed and are not dependent on the GeoCube’s code.</p><h2>Requirements</h2><p dir="ltr">The codes use the following dependencies with Python 3.8</p><ul><li>torch==2.0.0</li><li>torch_geometric==2.5.3</li><li>networkx==2.6.3</li><li>pyshp==2.3.1</li><li>tensorrt==8.6.1</li><li>matplotlib==3.7.2</li><li>scipy==1.10.1</li><li>scikit-learn==1.3.0</li><li>geopandas==0.13.2</li></ul><p><br></p>…”

<b>Code and derived data for</b><b>Training Sample Location Matters: Accuracy Impacts in LULC Classification</b> by Pajtim Zariqi (22155799)

“…</li><li>Python/Kaggle notebooks (<code>.ipynb</code>): reproducibility pipeline for accuracy metrics and statistical analysis.…”

Fig 4. - mdciao: Accessible Analysis and Visualization of Molecular Dynamics Simulation Data by Guillermo Pérez-Hernández (21156182)

<b>Use case codes of the DDS3 and DDS4 datasets for bacillus segmentation and tuberculosis diagnosis, respectively</b> by Marly G F Costa (19812192)

“…<p dir="ltr"><b>Use case codes of the DDS3 and DDS4 datasets for bacillus segmentation and tuberculosis diagnosis, respectively</b></p><p dir="ltr">The code was developed in the Google Collaboratory environment, using Python version 3.7.13, with TensorFlow 2.8.2. …”

Data and some code used in the paper:<b>Expansion quantization network: A micro-emotion detection and annotation framework</b> by Zhou (20184816)

“…Attached is the micro-emotion annotation code based on pytorch, which can be used to annotate the Goemotions dataset by yourself, or predict the emotion classification based on the annotation results. …”

Examples of insights derived from iModulons. by Anand V. Sastry (6619310)

BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories by Elizaveta Mukhaleva (20602550)

“…We describe here the software’s uses, the methods associated with it, and a comprehensive Python interface to the underlying generalist BNM code. …”