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121
The global dryland lake storage (GDLS) dataset
Published 2025“…</b><b>ipynb</b><br>A Python example to show the location of a given lake and to plot monthly time series of area/elevation/storage for this lake.…”
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122
Soulware-Lite
Published 2025“…</p><p><br></p><p dir="ltr">Soulware-Lite is the first live implementation of a cognitive conscience layer, born from architectural failures in AI output hallucination and anchored by integrity principles like MAP/ARP and RDIP. …”
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123
Gene Editing using Transformer Architecture
Published 2025“…Implementation requires Python and deep learning frameworks like TensorFlow or PyTorch, with optional use of Biopython for genetic sequence handling. …”
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124
Data sets and coding scripts for research on sensory processing in ADHD and ASD
Published 2025“…Informed consent was obtained from all participants, and all data have been anonymised following institutional and GDPR requirements.…”
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125
Demonstration of Isosteric Heat of Adsorption Calculation using AIFs and pyGAPs
Published 2025“…The data corresponds to carbon dioxide (CO2) adsorption on the metal-organic framework CALF-20 at six different temperatures ranging from 253 K to 373 K.</p><p dir="ltr">The calculation is performed using the Clausius-Clapeyron method as implemented in the <code><strong>pyGAPS</strong></code> Python library for adsorption science. …”
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126
Leue Modulation Coefficients (LMC): A Smooth Continuum Embedding of Bounded Arithmetic Data
Published 2025“…This Zenodo package includes: the full research paper (PDF), a complete Python implementation generating the LMC field and conductivity model, a numerical plot comparing discrete LMC values with the smoothed continuum field, a cover letter and supporting documentation. …”
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127
Probabilistic-QSR-GeoQA
Published 2024“…</p><p dir="ltr">- mln: Markov Logic Network (MLN) implementation of point-based CDC and region-based RCC relations required as input for Probcog and SparQ reasoners (This obtained from the study of [Duckham, M., Gabela, J., Kealy, A., Kyprianou, R., Legg, J., Moran, B., Rumi, S. …”
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128
A Fully Configurable Open-Source Software-Defined Digital Quantized Spiking Neural Core Architecture
Published 2025“…QUANTISENC’s software-defined hardware design methodology allows the user to train an SNN model using Python and evaluate performance of its hardware implementation, such as area, power, latency, and throughput. …”
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129
Genomic Surveillance of Pemivibart (VYD2311) Escape-Associated Mutations in SARS-CoV-2: December 2025 BioSamples (n=2)
Published 2025“…The samples (SRR36268464, SRR36225071) were retrieved from the NCBI Sequence Read Archive (SRA) and represent publicly available, real-world viral specimens collected during the final month of 2025, <b>the most recent temporal window available at the time of analysis.…”
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130
Accompanying data files (Melbourne, Washington DC, Singapore, and NYC-Manhattan)
Published 2025“…</p><p dir="ltr">Each zipped folder consists the following files:</p><ul><li>Graph data - City object nodes (.parquet) and COO format edges (.txt)</li><li>predictions.txt (model predictions from GraphSAGE model)</li><li>final_energy.parquet (Compiled training and validation building energy data)</li></ul><p dir="ltr">The provided files are supplementary to the code repository which provides Python notebooks stepping through the data preprocessing, GNN training, and satellite imagery download processes. …”
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131
Void-Center Galaxies and the Gravity of Probability Framework: Pre-DESI Consistency with VGS 12 and NGC 6789
Published 2025“…<br><br><br><b>ORCID ID: https://orcid.org/0009-0009-0793-8089</b><br></p><p dir="ltr"><b>Code Availability:</b></p><p dir="ltr"><b>All Python tools used for GoP simulations and predictions are available at:</b></p><p dir="ltr"><b>https://github.com/Jwaters290/GoP-Probabilistic-Curvature</b><br><br>The Gravity of Probability framework is implemented in this public Python codebase that reproduces all published GoP predictions from preexisting DESI data, using a single fixed set of global parameters. …”
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132
Contrast enhancement of digital images using dragonfly algorithm
Published 2024“…The Python implementation of the proposed approach is available in this <a href="https://github.com/somnath796/DA_contrast_enhancement" target="_blank">Github repository</a>.…”
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133
Compiled Global Dataset on Digital Business Model Research
Published 2025“…</p><p dir="ltr">For the modeling component, annual publication growth is projected from 2025–2034 using a logistic growth model (S-curve) implemented in Python. …”
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134
Interleg coordination in 103 adult <i>Hypsibius exemplaris</i> individuals.
Published 2024“…D. Probability density plot of ϕ<sub>C</sub> vs. ϕ<sub>I</sub> for second and third pair legs, n = 4414 strides. …”
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135
The artifacts and data for the paper "DD4AV: Detecting Atomicity Violations in Interrupt-Driven Programs with Guided Concolic Execution and Filtering" (OOPSLA 2025)
Published 2025“…</p><pre><pre>sudo apt-get install -y wget git build-essential python3 python python-pip python3-pip tmux cmake libtool libtool-bin automake autoconf autotools-dev m4 autopoint libboost-dev help2man gnulib bison flex texinfo zlib1g-dev libexpat1-dev libfreetype6 libfreetype6-dev libbz2-dev liblzo2-dev libtinfo-dev libssl-dev pkg-config libswscale-dev libarchive-dev liblzma-dev liblz4-dev doxygen libncurses5 vim intltool gcc-multilib sudo --fix-missing<br></pre></pre><pre><pre>pip install numpy && pip3 install numpy && pip3 install sysv_ipc<br></pre></pre><h4><b>Download the Code</b></h4><p dir="ltr">Download <b>DD4AV</b> from the Figshare website to your local machine and navigate to the project directory:</p><pre><pre>cd DD4AV<br></pre></pre><h4><b>Configure Environment and Install the Tool</b></h4><p dir="ltr">For convenience, we provide shell scripts to automate the installation process. …”
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136
Elements: Streaming Molecular Dynamics Simulation Trajectories for Direct Analysis – Applications to Sub-Picosecond Dynamics in Microsecond Simulations
Published 2025“…This eliminates the need for intermediate storage and allows immediate access to high-frequency fluctuations and vibrational signatures that would otherwise be inaccessible. We have implemented this streaming interface in the MD engines NAMD, LAMMPS, and GROMACS</p><p dir="ltr">On the client side, we developed the IMDClient Python package which receives the streamed data, stores into a custom buffer, and provides it to external tools as NumPy arrays, facilitating integration with scientific computing workflows. …”
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137
Bayesian Changepoint Detection via Logistic Regression and the Topological Analysis of Image Series
Published 2025“…The method also successfully recovers the location and nature of changes in more traditional changepoint tasks. An implementation of our method is available in the Python package bclr.…”
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138
Tracking when the number of individuals in the video frame changes.
Published 2025“…The diagram illustrates changes across different experimental conditions, with plots indicating the frequency for each keypoint and bars representing each ID pair. …”
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139
ReaxANA: Analysis of Reactive Dynamics Trajectories for Reaction Network Generation
Published 2025“…To address this challenge, we introduce a graph algorithm-based explicit denoising approach that defines user-controlled operations for removing oscillatory reaction patterns, including combination and separation, isomerization, and node contraction. This algorithm is implemented in ReaxANA, a parallel Python package designed to extract reaction mechanisms from both heterogeneous and homogeneous reactive MD trajectories. …”
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140
ReaxANA: Analysis of Reactive Dynamics Trajectories for Reaction Network Generation
Published 2025“…To address this challenge, we introduce a graph algorithm-based explicit denoising approach that defines user-controlled operations for removing oscillatory reaction patterns, including combination and separation, isomerization, and node contraction. This algorithm is implemented in ReaxANA, a parallel Python package designed to extract reaction mechanisms from both heterogeneous and homogeneous reactive MD trajectories. …”