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The codes and data for "A Graph Convolutional Neural Network-based Method for Predicting Computational Intensity of Geocomputation"
Published 2025“…The <b>innovations</b> and <b>steps</b> in Case 3, including data download, sample generation, and parallel computation optimization, were independently developed and are not dependent on the GeoCube’s code.</p><h2>Requirements</h2><p dir="ltr">The codes use the following dependencies with Python 3.8</p><ul><li>torch==2.0.0</li><li>torch_geometric==2.5.3</li><li>networkx==2.6.3</li><li>pyshp==2.3.1</li><li>tensorrt==8.6.1</li><li>matplotlib==3.7.2</li><li>scipy==1.10.1</li><li>scikit-learn==1.3.0</li><li>geopandas==0.13.2</li></ul><p><br></p>…”
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<b>Code and derived data for</b><b>Training Sample Location Matters: Accuracy Impacts in LULC Classification</b>
Published 2025“…</li><li>Python/Kaggle notebooks (<code>.ipynb</code>): reproducibility pipeline for accuracy metrics and statistical analysis.…”
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<b>Use case codes of the DDS3 and DDS4 datasets for bacillus segmentation and tuberculosis diagnosis, respectively</b>
Published 2025“…<p dir="ltr"><b>Use case codes of the DDS3 and DDS4 datasets for bacillus segmentation and tuberculosis diagnosis, respectively</b></p><p dir="ltr">The code was developed in the Google Collaboratory environment, using Python version 3.7.13, with TensorFlow 2.8.2. …”
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Data and some code used in the paper:<b>Expansion quantization network: A micro-emotion detection and annotation framework</b>
Published 2025“…Attached is the micro-emotion annotation code based on pytorch, which can be used to annotate the Goemotions dataset by yourself, or predict the emotion classification based on the annotation results. …”
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BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories
Published 2025“…We describe here the software’s uses, the methods associated with it, and a comprehensive Python interface to the underlying generalist BNM code. …”
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BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories
Published 2025“…We describe here the software’s uses, the methods associated with it, and a comprehensive Python interface to the underlying generalist BNM code. …”
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BaNDyT: Bayesian Network Modeling of Molecular Dynamics Trajectories
Published 2025“…We describe here the software’s uses, the methods associated with it, and a comprehensive Python interface to the underlying generalist BNM code. …”
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Data Sheet 1_COCαDA - a fast and scalable algorithm for interatomic contact detection in proteins using Cα distance matrices.pdf
Published 2025“…Here, we introduce COCαDA (COntact search pruning by Cα Distance Analysis), a Python-based command-line tool for improving search pruning in large-scale interatomic protein contact analysis using alpha-carbon (Cα) distance matrices. …”
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HCC Evaluation Dataset and Results
Published 2024“…The only requirement for running this script is a Python 3.6+ interpreter as well as an installation of the <code>numpy</code> package. …”
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Genosophus: A Dynamical-Systems Diagnostic Engine for Neural Representation Analysis
Published 2025“…</p><h2><b>Included Files</b></h2><h3><b>1. </b><code><strong>GenosophusV2.py</strong></code></h3><p dir="ltr">Executable Python implementation of the Genosophus Engine.…”
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Data and software for "Social networks affect redistribution decisions and polarization"
Published 2025“…</p><p dir="ltr">The repository contains data in .csv and .xlsx format, model code in .nlogox Netlogo format, analysis code in .ipynb Jupyter notebooks, and helping code in .py Python files.…”
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Overview of generalized weighted averages.
Published 2025“…GWA-UCB1 outperformed G-UCB1, UCB1-Tuned, and Thompson sampling in most problem settings and can be useful in many situations. The code is available at <a href="https://github.com/manome/python-mab" target="_blank">https://github.com/manome/python-mab</a>.…”
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